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Items: 14

Select item 108680091.

The evolution of ephemeral flora in Xinjiang, China: insights from plastid phylogenomic analyses of Brassicaceae

Tian-Wen Xiao, Feng Song, Duc Quy Vu, Ying Feng, Xue-Jun Ge

BMC Plant Biol. 2024; 24: 111. Published online 2024 Feb 15. doi: 10.1186/s12870-024-04796-0

PMCID:: PMC10868009

Abstract Article PDF–3.7M

Select item 63030282.

Plant evolution in alkaline magnesium-rich soils: A phylogenetic study of the Mediterranean genus Hormathophylla (Cruciferae: Alysseae) based on nuclear and plastid sequences

Esteban Salmerón-Sánchez, Javier Fuertes-Aguilar, Stanislav Španiel, Francisco Javier Pérez-García, Encarna Merlo, Juan Antonio Garrido-Becerra, Juan Mota

PLoS One. 2018; 13(12): e0208307. Published online 2018 Dec 21. doi: 10.1371/journal.pone.0208307

PMCID:: PMC6303028

Abstract Article PDF–3.1M

Select item 100160553.

Synteny Identifies Reliable Orthologs for Phylogenomics and Comparative Genomics of the Brassicaceae

Nora Walden, Michael Eric Schranz

Genome Biol Evol. 2023 Mar; 15(3): evad034. Published online 2023 Feb 28. doi: 10.1093/gbe/evad034

PMCID:: PMC10016055

Abstract Article PDF–1.3M

Select item 93922214.

Analysis of flavonol regulator evolution in the Brassicaceae reveals MYB12, MYB111 and MYB21 duplications and MYB11 and MYB24 gene loss

Hanna M. Schilbert, Beverley J. Glover

BMC Genomics. 2022; 23: 604. Published online 2022 Aug 19. doi: 10.1186/s12864-022-08819-8

PMCID:: PMC9392221

Abstract Article PDF–6.2M

Select item 87047965.

Evolutionary Analysis of the YABBY Gene Family in Brassicaceae

Yun-Hai Lu, Intikhab Alam, Yan-Qing Yang, Ya-Cen Yu, Wen-Chao Chi, Song-Biao Chen, Boulos Chalhoub, Li-Xi Jiang

Plants (Basel) 2021 Dec; 10(12): 2700. Published online 2021 Dec 8. doi: 10.3390/plants10122700

PMCID:: PMC8704796

Abstract Article PDF–6.3M

Select item 72863096.

Genomic Blocks in Aethionema arabicum Support Arabideae as Next Diverging Clade in Brassicaceae

Nora Walden, Thu-Phuong Nguyen, Terezie Mandáková, Martin A. Lysak, Michael Eric Schranz

Front Plant Sci. 2020; 11: 719. Published online 2020 Jun 3. doi: 10.3389/fpls.2020.00719

PMCID:: PMC7286309

Abstract Article PDF–1.1M

Select item 73614307.

Karyomorphology of three endemic plants (Brassicaceae: Euclidieae and Arabideae) from the Qinghai-Tibet Plateau and its significance

Wenguang Sun, Haixia Wang, Rui Wu, Hang Sun, Zhimin Li

Plant Divers. 2020 Jun; 42(3): 135–141. Published online 2020 Mar 19. doi: 10.1016/j.pld.2020.03.002

PMCID:: PMC7361430

Abstract Article PDF–1.1M

Select item 66763908.

The large genome size variation in the Hesperis clade was shaped by the prevalent proliferation of DNA repeats and rarer genome downsizing

Petra Hloušková, Terezie Mandáková, Milan Pouch, Pavel Trávníček, Martin A Lysak

Ann Bot. 2019 Aug; 124(1): 103–120. Published online 2019 Apr 11. doi: 10.1093/aob/mcz036

PMCID:: PMC6676390

Abstract Article PDF–1.8M

Select item 65851549.

Comprehensive evaluation of non-hybrid genome assembly tools for third-generation PacBio long-read sequence data

Vasanthan Jayakumar, Yasubumi Sakakibara

Brief Bioinform. 2019 May; 20(3): 866–876. Published online 2017 Nov 3. doi: 10.1093/bib/bbx147

PMCID:: PMC6585154

Abstract Article PDF–522K

Select item 554397410.

Monophyletic Origin and Evolution of the Largest Crucifer Genomes

Terezie Mandáková, Petra Hloušková, Dmitry A. German, Martin A. Lysak

Plant Physiol. 2017 Aug; 174(4): 2062–2071. Published online 2017 Jun 30. doi: 10.1104/pp.17.00457

PMCID:: PMC5543974

Abstract Article PDF–2.0M

Select item 541177211.

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data

Wen-Biao Jiao, Gonzalo Garcia Accinelli, Benjamin Hartwig, Christiane Kiefer, David Baker, Edouard Severing, Eva-Maria Willing, Mathieu Piednoel, Stefan Woetzel, Eva Madrid-Herrero, Bruno Huettel, Ulrike Hümann, Richard Reinhard, Marcus A. Koch, Daniel Swan, Bernardo Clavijo, George Coupland, Korbinian Schneeberger

Genome Res. 2017 May; 27(5): 778–786. doi: 10.1101/gr.213652.116

PMCID:: PMC5411772

Abstract Article PDF–715K

Select item 523978312.

Anastatica hierochuntica, an Arabidopsis Desert Relative, Is Tolerant to Multiple Abiotic Stresses and Exhibits Species-Specific and Common Stress Tolerance Strategies with Its Halophytic Relative, Eutrema (Thellungiella) salsugineum

Gil Eshel, Ruth Shaked, Yana Kazachkova, Asif Khan, Amir Eppel, Aroldo Cisneros, Tania Acuna, Yitzhak Gutterman, Noemi Tel-Zur, Shimon Rachmilevitch, Aaron Fait, Simon Barak

Front Plant Sci. 2016; 7: 1992. Published online 2017 Jan 17. doi: 10.3389/fpls.2016.01992

PMCID:: PMC5239783

Abstract Article PDF–3.8M

Select item 505976113.

Evolutionary interplay between sister cytochrome P450 genes shapes plasticity in plant metabolism

Zhenhua Liu, Raquel Tavares, Evan S. Forsythe, François André, Raphaël Lugan, Gabriella Jonasson, Stéphanie Boutet-Mercey, Takayuki Tohge, Mark A. Beilstein, Danièle Werck-Reichhart, Hugues Renault

Nat Commun. 2016; 7: 13026. Published online 2016 Oct 7. doi: 10.1038/ncomms13026