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Select item 110678791.

Phased nanopore assembly with Shasta and modular graph phasing with GFAse

Ryan Lorig-Roach, Melissa Meredith, Jean Monlong, Miten Jain, Hugh E. Olsen, Brandy McNulty, David Porubsky, Tessa G. Montague, Julian K. Lucas, Chris Condon, Jordan M. Eizenga, Sissel Juul, Sean K. McKenzie, Sara E. Simmonds, Jimin Park, Mobin Asri, Sergey Koren, Evan E. Eichler, Richard Axel, Bruce Martin, Paolo Carnevali, Karen H. Miga, Benedict Paten

Genome Res. 2024 Mar; 34(3): 454–468. doi: 10.1101/gr.278268.123

PMCID:: PMC11067879

Abstract Article PDF–4.1M

Select item 106873892.

The genome sequence of an ichneumonid wasp, Amblyteles armatorius (Forster, 1771)

Olga Sivell, Gavin R. Broad, Natural History Museum Genome Acquisition Lab, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium

Version 1. Wellcome Open Res. 2023; 8: 61. Published online 2023 Feb 6. doi: 10.12688/wellcomeopenres.18920.1

PMCID:: PMC10687389

Abstract Article PDF–2.0M

Select item 106381423.

Semantic representation of neural circuit knowledge in Caenorhabditis elegans

Sharan J. Prakash, Kimberly M. Van Auken, David P. Hill, Paul W. Sternberg

Brain Inform. 2023 Dec; 10(1): 30. Published online 2023 Nov 10. doi: 10.1186/s40708-023-00208-5

Correction in:: Brain Inform. 2024 Dec; 11(1): 13.

PMCID:: PMC10638142

Abstract Article PDF–2.3M

Select item 105924594.

SAMPL is a high-throughput solution to study unconstrained vertical behavior in small animals

Yunlu Zhu, Franziska Auer, Hannah Gelnaw, Samantha N. Davis, Kyla R. Hamling, Christina E. May, Hassan Ahamed, Niels Ringstad, Katherine I. Nagel, David Schoppik

Cell Rep. Author manuscript; available in PMC 2023 Oct 23.

Published in final edited form as: Cell Rep. 2023 Jun 27; 42(6): 112573. Published online 2023 Jun 1. doi: 10.1016/j.celrep.2023.112573

PMCID:: PMC10592459

Abstract Article PDF–2.1M

Select item 105856365.

The hidden threat: Exploring the parasite burden and feeding habits of invasive raccoon dogs (Nyctereutes procyonoides) in central Europe

Anna V. Schantz, Dorian D. Dörge, Norbert Peter, Sven Klimpel

Int J Parasitol Parasites Wildl. 2023 Dec; 22: 155–166. Published online 2023 Oct 8. doi: 10.1016/j.ijppaw.2023.10.004

PMCID:: PMC10585636

Abstract Article PDF–6.0M

Select item 103753646.

Commodity risk assessment of Fagus sylvatica plants from the UK

EFSA Panel on Plant Health (PLH), Claude Bragard, Paula Baptista, Elisavet Chatzivassiliou, Francesco Di Serio, Josep Anton Jaques Miret, Annemarie Fejer Justesen, Alan MacLeod, Christer Sven Magnusson, Panagiotis Milonas, Juan A Navas‐Cortes, Stephen Parnell, Roel Potting, Philippe Lucien Reignault, Emilio Stefani, Hans‐Hermann Thulke, Wopke Van der Werf, Antonio Vicent Civera, Jonathan Yuen, Lucia Zappalà, Andrea Battisti, Hugo Mas, Daniel Rigling, Massimo Faccoli, Ciro Gardi, Giovanni Iacopetti, Alžběta Mikulová, Olaf Mosbach‐Schulz, Fabio Stergulc, Franz Streissl, Paolo Gonthier

EFSA J. 2023 Jul; 21(7): e08118. Published online 2023 Jul 28. doi: 10.2903/j.efsa.2023.8118

PMCID:: PMC10375364

Abstract Article PDF–12M

Select item 101683307.

Semantic Representation of Neural Circuit Knowledge in Caenorhabditis elegans

Sharan J. Prakash, Kimberly M. Van Auken, David P. Hill, Paul W. Sternberg

Version 4. bioRxiv. Preprint. 2023 Apr 30 [revised 2023 Sep 26]. doi: 10.1101/2023.04.28.538760

Published in:: Brain Inform. 2023 Dec; 10(1): 30.

PMCID:: PMC10168330

Abstract Article PDF–2.0M

Select item 101588408.

Xenbase: key features and resources of the Xenopus model organism knowledgebase

Malcolm Fisher, Christina James-Zorn, Virgilio Ponferrada, Andrew J Bell, Nivitha Sundararaj, Erik Segerdell, Praneet Chaturvedi, Nadia Bayyari, Stanley Chu, Troy Pells, Vaneet Lotay, Sergei Agalakov, Dong Zhuo Wang, Bradley I Arshinoff, Saoirse Foley, Kamran Karimi, Peter D Vize, Aaron M Zorn

Genetics. 2023 May; 224(1): iyad018. Published online 2023 Feb 9. doi: 10.1093/genetics/iyad018

PMCID:: PMC10158840

Abstract Article PDF–1.2M

Select item 101235409.

Commodity risk assessment of Crataegus monogyna plants from the UK

EFSA Panel on Plant Health (PLH), Claude Bragard, Paula Baptista, Elisavet Chatzivassiliou, Francesco Di Serio, Paolo Gonthier, Josep Anton Jaques Miret, Annemarie Fejer Justesen, Alan MacLeod, Christer Sven Magnusson, Panagiotis Milonas, Juan A Navas‐Cortes, Stephen Parnell, Philippe Lucien Reignault, Emilio Stefani, Hans‐Hermann Thulke, Wopke Van der Werf, Antonio Vicent Civera, Jonathan Yuen, Lucia Zappalà, Ciro Gardi, Olaf Mosbach Schulz, Antigoni Akrivou, Spyridon Antonatos, Despoina Beris, Christos Kritikos, Maria Kormpi, Dimitrios Papachristos, Chrysavgi Reppa, Roel Potting

EFSA J. 2023 Apr; 21(4): e08003. Published online 2023 Apr 24. doi: 10.2903/j.efsa.2023.8003

PMCID:: PMC10123540

Abstract Article PDF–2.6M

Select item 998010110.

Phased nanopore assembly with Shasta and modular graph phasing with GFAse

Ryan Lorig-Roach, Melissa Meredith, Jean Monlong, Miten Jain, Hugh Olsen, Brandy McNulty, David Porubsky, Tessa Montague, Julian Lucas, Chris Condon, Jordan Eizenga, Sissel Juul, Sean McKenzie, Sara E. Simmonds, Jimin Park, Mobin Asri, Sergey Koren, Evan Eichler, Richard Axel, Bruce Martin, Paolo Carnevali, Karen Miga, Benedict Paten

Version 1. bioRxiv. Preprint. 2023 Feb 22. doi: 10.1101/2023.02.21.529152

Published in:: Genome Res. 2024 Mar; 34(3): 454–468.

PMCID:: PMC9980101

Abstract Article PDF–2.0M

Select item 988189311.

Scalable Apparatus to Measure Posture and Locomotion (SAMPL): a high-throughput solution to study unconstrained vertical behavior in small animals

Yunlu Zhu, Franziska Auer, Hannah Gelnaw, Samantha N. Davis, Kyla R. Hamling, Christina E. May, Hassan Ahamed, Niels Ringstad, Katherine I. Nagel, David Schoppik

Version 2. bioRxiv. Preprint. 2023 Jan 7 [revised 2023 Mar 27]. doi: 10.1101/2023.01.07.523102

Published in:: Cell Rep. 2023 Jun 27; 42(6): 112573.

PMCID:: PMC9881893

Abstract Article PDF–7.0M

Select item 960881012.

The lunar nodal phase cycle and winter atmospheric pressure as possible determinants of moth abundance: Analyses of a 30‐year time series from South Norway

Vidar Selås, Sverre Kobro

Ecol Evol. 2022 Oct; 12(10): e9443. Published online 2022 Oct 27. doi: 10.1002/ece3.9443

PMCID:: PMC9608810

Abstract Article PDF–3.3M

Select item 955472113.

Selfish herd effects depend on prey crypsis

Hannah Piccolo, David Beresford, Thomas J. Hossie

Biol Lett. 2022 Oct; 18(10): 20220242. Published online October 12, 2022. doi: 10.1098/rsbl.2022.0242

PMCID:: PMC9554721

Abstract Article PDF–1010K

Select item 950241414.

Ultrastructure Characteristics and Sexual Dimorphism of Antennal Sensilla in Tirathaba rufivena (Lepidoptera: Pyralidae)

Jixing Guo, Zimeng Du, Guangchao Cui, Zheng Wang, Junfang Wang, Xiang Zhou

Insects. 2022 Sep; 13(9): 797. Published online 2022 Sep 1. doi: 10.3390/insects13090797

PMCID:: PMC9502414

Abstract Article PDF–9.2M

Select item 904664415.

The International Trichinella Reference Centre database. Report on thirty-three years of activity and future perspectives

G. Marucci, D. Tonanzi, M. Interisano, P. Vatta, F. Galati, G. La Rosa

Food Waterborne Parasitol. 2022 Jun; 27: e00156. Published online 2022 Apr 19. doi: 10.1016/j.fawpar.2022.e00156

PMCID:: PMC9046644

Abstract Article PDF–2.0M

Select item 898421316.

The genome sequence of a parasitoid wasp, Ichneumon xanthorius Forster, 1771

University of Oxford and Wytham Woods Genome Acquisition Lab, Gavin Broad, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium

Version 1. Wellcome Open Res. 2022; 7: 47. Published online 2022 Feb 10. doi: 10.12688/wellcomeopenres.17683.1

PMCID:: PMC8984213

Abstract Article PDF–2.8M

Select item 883408317.

Development of a 3D Printer for the Manufacture of Functional Food Protein Gels

Stéphane Portanguen, Pascal Tournayre, Paul Gibert, Selma Leonardi, Thierry Astruc, Pierre-Sylvain Mirade

Foods. 2022 Feb; 11(3): 458. Published online 2022 Feb 3. doi: 10.3390/foods11030458

PMCID:: PMC8834083

Abstract Article PDF–6.5M

Select item 866874018.

Do the evolutionary interactions between moths and bats promote niche partitioning between bats and birds?

Lorinda S. Bullington, Mathew T. Seidensticker, Nathan Schwab, Philip W. Ramsey, Kate Stone

Ecol Evol. 2021 Dec; 11(23): 17160–17178. Published online 2021 Nov 19. doi: 10.1002/ece3.8355

PMCID:: PMC8668740

Abstract Article PDF–1.3M

Select item 928505819.

Combining DNA metabarcoding and ecological networks to inform conservation biocontrol by small vertebrate predators

Vanessa A. Mata, Luis P. da Silva, Joana Veríssimo, Pedro Horta, Helena Raposeira, Gary F. McCracken, Hugo Rebelo, Pedro Beja

Ecol Appl. 2021 Dec; 31(8): e02457. Published online 2021 Oct 14. doi: 10.1002/eap.2457

PMCID:: PMC9285058

Abstract Article PDF–318K

Select item 838693220.

Street lighting has detrimental impacts on local insect populations

Douglas H. Boyes, Darren M. Evans, Richard Fox, Mark S. Parsons, Michael J. O. Pocock

Sci Adv. 2021 Aug; 7(35): eabi8322. Published online 2021 Aug 25. doi: 10.1126/sciadv.abi8322

PMCID:: PMC8386932

Abstract Article PDF–204K

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