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Select item 107462501.

Comprehensive analysis of 66 complete molluscum contagiosum virus (MOCV) genomes: characterization and functional annotation of 47 novel complete MOCV genomes, including the first genome of MOCV genotype 3, and a proposal for harmonized MOCV genotyping indexing

Tomaž Mark Zorec, Erik Alm, Maria Lind Karlberg, Reza Advani, Lea Hošnjak, Mario Poljak

mBio. 2023 Nov-Dec; 14(6): e02224-23. Published online 2023 Nov 10. doi: 10.1128/mbio.02224-23

PMCID:: PMC10746250

Abstract Article PDF–1.4M

Select item 105586952.

Integrated Human Skin Bacteria Genome Catalog Reveals Extensive Unexplored Habitat‐Specific Microbiome Diversity and Function

Zhiming Li, Yanmei Ju, Jingjing Xia, Zhe Zhang, Hefu Zhen, Xin Tong, Yuzhe Sun, Haorong Lu, Yang Zong, Peishan Chen, Kaiye Cai, Zhen Wang, Huanming Yang, Jiucun Wang, Jian Wang, Yong Hou, Xin Jin, Tao Zhang, Wenwei Zhang, Xun Xu, Liang Xiao, Ruijin Guo, Chao Nie

Adv Sci (Weinh) 2023 Oct; 10(28): 2300050. Published online 2023 Aug 7. doi: 10.1002/advs.202300050

PMCID:: PMC10558695

Abstract Article PDF–3.8M

Select item 92164703.

SKIOME Project: a curated collection of skin microbiome datasets enriched with study-related metadata

Giulia Agostinetto, Davide Bozzi, Danilo Porro, Maurizio Casiraghi, Massimo Labra, Antonia Bruno

Database (Oxford) 2022; 2022: baac033. Published online 2022 May 16. doi: 10.1093/database/baac033

PMCID:: PMC9216470

Abstract Article PDF–2.3M

Select item 83047654.

Treat Me Well or Will Resist: Uptake of Mobile Genetic Elements Determine the Resistome of Corynebacterium striatum

Benjamin Leyton, Juliana Nunes Ramos, Paulo Victor Pereira Baio, João Flávio Carneiro Veras, Cassius Souza, Andreas Burkovski, Ana Luíza Mattos-Guaraldi, Verônica Viana Vieira, Michel Abanto Marin

Int J Mol Sci. 2021 Jul; 22(14): 7499. Published online 2021 Jul 13. doi: 10.3390/ijms22147499

PMCID:: PMC8304765

Abstract Article PDF–1.6M

Select item 81467005.

First Description of the Composition and the Functional Capabilities of the Skin Microbial Community Accompanying Severe Scabies Infestation in Humans

Charlotte Bernigaud, Martha Zakrzewski, Sara Taylor, Pearl M. Swe, Anthony T. Papenfuss, Kadaba S. Sriprakash, Deborah Holt, Olivier Chosidow, Bart J. Currie, Katja Fischer

Microorganisms. 2021 May; 9(5): 907. Published online 2021 Apr 23. doi: 10.3390/microorganisms9050907

PMCID:: PMC8146700

Abstract Article PDF–2.0M

Select item 77769926.

1206. Association of Aging, Frailty and Place of Residence with Skin, Oral and Gut Microbiome Characteristics and Pathogenicity Reservoirs

Peter J Larson, Julia Oh, Julie Robison, James Grady, George Kuchel

Open Forum Infect Dis. 2020 Oct; 7(Suppl 1): S625. Published online 2020 Dec 31. doi: 10.1093/ofid/ofaa439.1391

PMCID:: PMC7776992

Abstract PDF–268K

Select item 77053497.

Dysbiotic Lesional Microbiome With Filaggrin Missense Variants Associate With Atopic Dermatitis in India

Shankha Nath, Naina Kumari, Debabrata Bandyopadhyay, Neloy Sinha, Partha P. Majumder, Rupak Mitra, Souvik Mukherjee

Front Cell Infect Microbiol. 2020; 10: 570423. Published online 2020 Nov 17. doi: 10.3389/fcimb.2020.570423

PMCID:: PMC7705349

Abstract Article PDF–4.9M

Select item 74884298.

Estimating the quality of eukaryotic genomes recovered from metagenomic analysis with EukCC

Paul Saary, Alex L. Mitchell, Robert D. Finn

Genome Biol. 2020; 21: 244. Published online 2020 Sep 10. doi: 10.1186/s13059-020-02155-4

PMCID:: PMC7488429

Abstract Article PDF–1.6M

Select item 68800429.

Cutibacterium acnes (Propionibacterium acnes) 16S rRNA Genotyping of Microbial Samples from Possessions Contributes to Owner Identification

Jiayue Yang, Tomoya Tsukimi, Mia Yoshikawa, Kenta Suzuki, Tomoki Takeda, Masaru Tomita, Shinji Fukuda

mSystems. 2019 Nov-Dec; 4(6): e00594-19. Published online 2019 Nov 26. doi: 10.1128/mSystems.00594-19

PMCID:: PMC6880042

Abstract Article PDF–655K

Select item 659350010.

Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system

Vincent Somerville, Stefanie Lutz, Michael Schmid, Daniel Frei, Aline Moser, Stefan Irmler, Jürg E. Frey, Christian H. Ahrens

BMC Microbiol. 2019; 19: 143. Published online 2019 Jun 25. doi: 10.1186/s12866-019-1500-0

PMCID:: PMC6593500

Abstract Article PDF–2.9M

Select item 609592911.

Novel phages of healthy skin metaviromes from South Africa

Leonardo Joaquim van Zyl, Yoonus Abrahams, Emily Amor Stander, Bronwyn Kirby-McCollough, Roland Jourdain, Cécile Clavaud, Lionel Breton, Marla Trindade

Sci Rep. 2018; 8: 12265. Published online 2018 Aug 16. doi: 10.1038/s41598-018-30705-1

PMCID:: PMC6095929

Abstract Article PDF–1.9M

Select item 548141812.

Unexplored diversity and strain-level structure of the skin microbiome associated with psoriasis

Adrian Tett, Edoardo Pasolli, Stefania Farina, Duy Tin Truong, Francesco Asnicar, Moreno Zolfo, Francesco Beghini, Federica Armanini, Olivier Jousson, Veronica De Sanctis, Roberto Bertorelli, Giampiero Girolomoni, Mario Cristofolini, Nicola Segata

NPJ Biofilms Microbiomes. 2017; 3: 14. Published online 2017 Jun 22. doi: 10.1038/s41522-017-0022-5

PMCID:: PMC5481418

Abstract Article PDF–2.6M

Select item 546013913.

Microbial biofilms and the human skin microbiome

Michael Brandwein, Doron Steinberg, Shiri Meshner

NPJ Biofilms Microbiomes. 2016; 2: 3. Published online 2016 Nov 23. doi: 10.1038/s41522-016-0004-z

PMCID:: PMC5460139

Abstract Article PDF–830K

Select item 454204114.

The diversity and host interactions of Propionibacterium acnes bacteriophages on human skin

Jared Liu, Riceley Yan, Qiao Zhong, Sam Ngo, Nathanael J Bangayan, Lin Nguyen, Timothy Lui, Minghsun Liu, Marie C Erfe, Noah Craft, Shuta Tomida, Huiying Li

ISME J. 2015 Sep; 9(9): 2078–2093. Published online 2015 Apr 7. doi: 10.1038/ismej.2015.47

Correction in:: ISME J. 2015 Sep; 9(9): 2116.

PMCID:: PMC4542041

Abstract Article PDF–1.4M

Select item 398663515.

Consistency of metagenomic assignment programs in simulated and real data

Koldo Garcia-Etxebarria, Marc Garcia-Garcerà, Francesc Calafell

BMC Bioinformatics. 2014; 15: 90. Published online 2014 Mar 28. doi: 10.1186/1471-2105-15-90

PMCID:: PMC3986635

Abstract Article PDF–442K

Select item 1079845416.

Finding Candida auris in public metagenomic repositories

Jorge E. Mario-Vasquez, Ujwal R. Bagal, Elijah Lowe, Aleksandr Morgulis, John Phan, D. Joseph Sexton, Sergey Shiryev, Rytis Slatkevičius, Rory Welsh, Anastasia P. Litvintseva, Matthew Blumberg, Richa Agarwala, Nancy A. Chow

PLoS One. 2024; 19(1): e0291406. Published online 2024 Jan 19. doi: 10.1371/journal.pone.0291406