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Select item 109615861.

Metabarcoding reveals unique microbial mat communities and evidence of biogeographic influence in low‐oxygen, high‐sulfur sinkholes and springs

Davis Fray, Callahan A. McGovern, Dale A. Casamatta, Bopaiah A. Biddanda, Sarah E. Hamsher

Ecol Evol. 2024 Mar; 14(3): e11162. Published online 2024 Mar 24. doi: 10.1002/ece3.11162

PMCID:: PMC10961586

Abstract Article PDF–9.2M

Select item 107407402.

Gut Bacteriomes and Ecological Niche Divergence: An Example of Two Cryptic Gastropod Species

Elizaveta Gafarova, Dmitrii Kuracji, Karina Sogomonyan, Ivan Gorokhov, Dmitrii Polev, Ekaterina Zubova, Elena Golikova, Andrey Granovitch, Arina Maltseva

Biology (Basel) 2023 Dec; 12(12): 1521. Published online 2023 Dec 13. doi: 10.3390/biology12121521

PMCID:: PMC10740740

Abstract Article PDF–1.6M

Select item 107458473.

Diatom–Bacteria Interactions in the Marine Environment: Complexity, Heterogeneity, and Potential for Biotechnological Applications

Federica Di Costanzo, Valeria Di Dato, Giovanna Romano

Microorganisms. 2023 Dec; 11(12): 2967. Published online 2023 Dec 12. doi: 10.3390/microorganisms11122967

PMCID:: PMC10745847

Abstract Article PDF–1.7M

Select item 102339094.

Epiphytic common core bacteria in the microbiomes of co-located green (Ulva), brown (Saccharina) and red (Grateloupia, Gelidium) macroalgae

De-Chen Lu, Feng-Qing Wang, Rudolf I. Amann, Hanno Teeling, Zong-Jun Du

Microbiome. 2023; 11: 126. Published online 2023 Jun 1. doi: 10.1186/s40168-023-01559-1

PMCID:: PMC10233909

Abstract Article PDF–12M

Select item 84278045.

Brazilian Semi-Arid Mangroves-Associated Microbiome as Pools of Richness and Complexity in a Changing World

Tallita Cruz Lopes Tavares, Walderly Melgaço Bezerra, Leonardo Ribeiro Oliveira Normando, Alexandre Soares Rosado, Vânia Maria Maciel Melo

Front Microbiol. 2021; 12: 715991. Published online 2021 Aug 26. doi: 10.3389/fmicb.2021.715991

PMCID:: PMC8427804

Abstract Article PDF–5.9M

Select item 58961386.

Genome sequence of Planktotalea frisia type strain (SH6-1^T), a representative of the Roseobacter group isolated from the North Sea during a phytoplankton bloom

Insa Bakenhus, Sonja Voget, Anja Poehlein, Thorsten Brinkhoff, Rolf Daniel, Meinhard Simon

Stand Genomic Sci. 2018; 13: 7. Published online 2018 Apr 11. doi: 10.1186/s40793-018-0311-5

PMCID:: PMC5896138

Abstract Article PDF–1.1M

Select item 110597317.

Ecology of aerobic anoxygenic phototrophs on a fine-scale taxonomic resolution in Adriatic Sea unravelled by unsupervised neural network

Iva Stojan, Danijela Šantić, Cristian Villena-Alemany, Željka Trumbić, Frano Matić, Ana Vrdoljak Tomaš, Ivana Lepen Pleić, Kasia Piwosz, Grozdan Kušpilić, Živana Ninčević Gladan, Stefanija Šestanović, Mladen Šolić

Environ Microbiome. 2024; 19: 28. Published online 2024 Apr 29. doi: 10.1186/s40793-024-00573-6

PMCID:: PMC11059731

Abstract Article PDF–4.8M

Select item 108469518.

The source of microbial transmission influences niche colonization and microbiome development

Isabel S. Tanger, Julia Stefanschitz, Yannick Schwert, Olivia Roth

Proc Biol Sci. 2024 Feb; 291(2016): 20232036. Published online Feburary 7, 2024. doi: 10.1098/rspb.2023.2036

PMCID:: PMC10846951

Abstract Article PDF–1.1M

Select item 106874529.

Biological effects of trans, trans-farnesol in Leishmania amazonensis

Liliane Sena Pinheiro, Valter Viana Andrade-Neto, Marcio Mantuano-Barradas, Elisa Cavalcante Pereira, Rodrigo Cesar Fernandes Barbosa, Marcia Cristina Campos de Oliveira, Rubem Figueiredo Sadok Menna-Barreto, Edézio Ferreira Cunha-Júnior, Eduardo Caio Torres-Santos

Front Cell Infect Microbiol. 2023; 13: 1221246. Published online 2023 Nov 16. doi: 10.3389/fcimb.2023.1221246

PMCID:: PMC10687452

Abstract Article PDF–2.5M

Select item 979889210.

Particle-associated bacteria in seawater dominate the colony-forming microbiome on ZoBell marine agar

Anneke Heins, Jens Harder

FEMS Microbiol Ecol. 2023 Jan; 99(1): fiac151. Published online 2022 Dec 13. doi: 10.1093/femsec/fiac151

PMCID:: PMC9798892

Abstract Article PDF–2.9M

Select item 902994311.

Degradation of Alginate by a Newly Isolated Marine Bacterium Agarivorans sp. B2Z047

Xun-Ke Sun, Ya Gong, Dan-Dan Shang, Bang-Tao Liu, Zong-Jun Du, Guan-Jun Chen

Mar Drugs. 2022 Apr; 20(4): 254. Published online 2022 Apr 4. doi: 10.3390/md20040254

PMCID:: PMC9029943

Abstract Article PDF–4.3M

Select item 887933712.

Assessment of Hydrocarbon Degradation Potential in Microbial Communities in Arctic Sea Ice

Angela Peeb, Nga Phuong Dang, Marika Truu, Hiie Nõlvak, Chris Petrich, Jaak Truu

Microorganisms. 2022 Feb; 10(2): 328. Published online 2022 Feb 1. doi: 10.3390/microorganisms10020328

PMCID:: PMC8879337

Abstract Article PDF–5.9M

Select item 862328413.

Characterization of the Microbiome of Corals with Stony Coral Tissue Loss Disease along Florida’s Coral Reef

Abigail S. Clark, Sara D. Williams, Kerry Maxwell, Stephanie M. Rosales, Lindsay K. Huebner, Jan H. Landsberg, John H. Hunt, Erinn M. Muller

Microorganisms. 2021 Nov; 9(11): 2181. Published online 2021 Oct 20. doi: 10.3390/microorganisms9112181

PMCID:: PMC8623284

Abstract Article PDF–4.1M

Select item 850723614.

Integration of spatio-temporal variations of surface metabolomes and epibacterial communities highlights the importance of copper stress as a major factor shaping host-microbiota interactions within a Mediterranean seaweed holobiont

Benoît Paix, Nicolas Layglon, Christophe Le Poupon, Sébastien D’Onofrio, Benjamin Misson, Cédric Garnier, Gérald Culioli, Jean-François Briand

Microbiome. 2021; 9: 201. Published online 2021 Oct 12. doi: 10.1186/s40168-021-01124-8

PMCID:: PMC8507236

Abstract Article PDF–5.5M

Select item 838334215.

Tight Adherence (Tad) Pilus Genes Indicate Putative Niche Differentiation in Phytoplankton Bloom Associated Rhodobacterales

Ashley Isaac, Ben Francis, Rudolf I. Amann, Shady A. Amin

Front Microbiol. 2021; 12: 718297. Published online 2021 Aug 10. doi: 10.3389/fmicb.2021.718297

PMCID:: PMC8383342

Abstract Article PDF–3.9M

Select item 837773816.

A Combined Digital PCR and Next Generation DNA-Sequencing Based Approach for Tracking Nearshore Pollutant Dynamics Along the Southwest United States/Mexico Border

Amity G. Zimmer-Faust, Joshua A. Steele, Xianyi Xiong, Christopher Staley, Madison Griffith, Michael J. Sadowsky, Margarita Diaz, John F. Griffith

Front Microbiol. 2021; 12: 674214. Published online 2021 Aug 6. doi: 10.3389/fmicb.2021.674214

PMCID:: PMC8377738

Abstract Article PDF–3.7M

Select item 832017117.

Comparative Analysis of 16S rRNA Gene and Metagenome Sequencing in Pediatric Gut Microbiomes

Danielle Peterson, Kevin S. Bonham, Sophie Rowland, Cassandra W. Pattanayak, RESONANCE Consortium, Vanja Klepac-Ceraj

Front Microbiol. 2021; 12: 670336. Published online 2021 Jul 15. doi: 10.3389/fmicb.2021.670336

PMCID:: PMC8320171

Abstract Article PDF–1.9M

Select item 804713918.

Particle Collection in Imhoff Sedimentation Cones Enriches Both Motile Chemotactic and Particle-Attached Bacteria

Anneke Heins, Greta Reintjes, Rudolf I. Amann, Jens Harder

Front Microbiol. 2021; 12: 643730. Published online 2021 Apr 1. doi: 10.3389/fmicb.2021.643730

PMCID:: PMC8047139

Abstract Article PDF–5.6M

Select item 787096619.

Meta-analysis cum machine learning approaches address the structure and biogeochemical potential of marine copepod associated bacteriobiomes

Balamurugan Sadaiappan, Chinnamani PrasannaKumar, V. Uthara Nambiar, Mahendran Subramanian, Manguesh U. Gauns

Sci Rep. 2021; 11: 3312. Published online 2021 Feb 8. doi: 10.1038/s41598-021-82482-z

PMCID:: PMC7870966

Abstract Article PDF–4.0M

Select item 728706320.

Genome-enabled phylogenetic and functional reconstruction of an araphid pennate diatom Plagiostriata sp. CCMP470, previously assigned as a radial centric diatom, and its bacterial commensal

Shinya Sato, Deepak Nanjappa, Richard G. Dorrell, Fabio Rocha Jimenez Vieira, Elena Kazamia, Leila Tirichine, Alaguraj Veluchamy, Roland Heilig, Jean-Marc Aury, Olivier Jaillon, Patrick Wincker, Zoltan Fussy, Miroslav Obornik, Sergio A. Muñoz-Gómez, David G. Mann, Chris Bowler, Adriana Zingone

Sci Rep. 2020; 10: 9449. Published online 2020 Jun 10. doi: 10.1038/s41598-020-65941-x