GTR Test Accession:
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GTR000607962.1
CAP
Registered in GTR:
2023-08-15
View version history
GTR000607962.1,
registered in GTR:
2023-08-15
Last annual review date for the lab: 2024-07-05
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At a Glance
Methods (1):
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Molecular Genetics - Targeted variant analysis: PCR with allele specific hybridization
Target population: Help
Patients who are suspected of non-standard medication metabolism or response, …
Clinical validity:
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Not provided
Clinical utility:
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Guidance for selecting a drug therapy and/or dose
Ordering Information
Offered by:
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Specimen Source:
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- Buccal swab
- Peripheral (whole) blood
Who can order: Help
- Health Care Provider
- Nurse Practitioner
Test Order Code:
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PMP
Informed consent required:
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Yes
Pre-test genetic counseling required:
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Decline to answer
Post-test genetic counseling required:
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Decline to answer
Recommended fields not provided:
How to Order,
Lab contact for this test,
Contact policy,
Test strategy,
Test development
Conditions
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Total conditions: 1
Condition/Phenotype | Identifier |
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Test Targets
Genes
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Total genes: 12
Gene | Associated Condition | Germline or Somatic | Allele (Lab-provided) | Variant in NCBI |
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Methodology
Total methods: 1
Method Category
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Test method
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Instrument *
Targeted variant analysis
PCR with allele specific hybridization
* Instrument: Not provided
Clinical Information
Test purpose:
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Drug Response
Clinical utility:
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Guidance for selecting a drug therapy and/or dose
View citations (1)
- Pharmacogenetic testing: Current Evidence of Clinical Utility. Moaddeb J, et al. Ther Adv Drug Saf. 2013;4(4):155-169. doi:10.1177/2042098613485595. PMID: 24020014.
Target population:
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Patients who are suspected of non-standard medication metabolism or response, are suspected of being at risk of adverse drug reactions, have a personal or family history of adverse drug reactions, or have a family member with a known variant of pharmacogenomic significance.
View citations (1)
- Hiratsuka M, Zhou Y, Lauschke VM. Editorial: Population Pharmacogenomics (PGx): From Variant Identification to Clinical Implementation. Front Genet. 2021;12:736626. doi:10.3389/fgene.2021.736626. Epub 2021 Aug 05. PMID: 34422026.
Recommended fields not provided:
Clinical validity,
What is the protocol for interpreting a variation as a VUS?,
Are family members with defined clinical status recruited to assess significance of VUS without charge?,
Will the lab re-contact the ordering physician if variant interpretation changes?,
Is research allowed on the sample after clinical testing is complete?,
Sample negative report,
Sample positive report
Technical Information
Availability:
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Tests performed
Entire test performed in-house
Entire test performed in-house
Analytical Validity:
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The GDI Pain Management Pharmacogenomics Panel genotypes 12 genes using multiplex PCR and MALDI-TOF Mass Spectrometry. This pharmacogenomics panel was validated by Genesys Diagnostics and has has 100% Sensitivity and 100% Specificity.
Proficiency testing (PT):
Is proficiency testing performed for this test?
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Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
College of American Pathologists, CAP
CAP Testing Information (legacy) Help
CAP/ACMG Molecular Genetics Series; Factor II (F2 gene); MGL1
CAP/ACMG Molecular Genetics Series; Factor V Leiden (F5 gene); MGL1
CAP/ACMG Molecular Genetics Series; Methylenetetra-hydrofolate reductase (MTHFR gene); MGL1
Pharmacogenetics; CYP2B6; PGX
Pharmacogenetics; CYP2C19; PGX
Pharmacogenetics; CYP2C9; PGX
Pharmacogenetics; CYP2D6; PGX
Pharmacogenetics; CYP3A4; PGX
Pharmacogenetics; CYP3A5; PGX
Yes
Method used for proficiency testing: Help
Formal PT program
PT Provider: Help
College of American Pathologists, CAP
CAP Testing Information (legacy) Help
CAP/ACMG Molecular Genetics Series; Factor II (F2 gene); MGL1
CAP/ACMG Molecular Genetics Series; Factor V Leiden (F5 gene); MGL1
CAP/ACMG Molecular Genetics Series; Methylenetetra-hydrofolate reductase (MTHFR gene); MGL1
Pharmacogenetics; CYP2B6; PGX
Pharmacogenetics; CYP2C19; PGX
Pharmacogenetics; CYP2C9; PGX
Pharmacogenetics; CYP2D6; PGX
Pharmacogenetics; CYP3A4; PGX
Pharmacogenetics; CYP3A5; PGX
Recommended fields not provided:
Test Confirmation,
Assay limitations,
Description of internal test validation method,
Citations for Analytical validity,
Description of PT method
Regulatory Approval
FDA Review:
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Not provided
Additional Information
Reviews:
Clinical resources:
Consumer resources:
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Patients and consumers
with specific questions about a genetic test should contact a health care provider or a genetics professional.