|
| Status |
Public on May 06, 2013 |
| Title |
PHEO_AG_HS_132 |
| Sample type |
genomic |
| |
|
| Source name |
paraganglioma, benign
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: paraganglioma
Sex: male
mutation (gene): MAX
mutation (type): somatic
malignancy: benign
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted from frozen tissue samples using a QIAamp DNA mini kit or an AllPrep kit (Qiagen).
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina protocol.
|
| |
|
| Hybridization protocol |
Standard Illumina protocol.
|
| Scan protocol |
Standard Illumina protocol.
|
| Description |
paraganglioma
|
| Data processing |
Standard Illumina protocol. Beta values were exported from Illumina Beadstudio software.
|
| |
|
| Submission date |
Jul 09, 2012 |
| Last update date |
May 06, 2013 |
| Contact name |
Eric Letouzé |
| E-mail(s) |
Eric.letouze@inserm.fr
|
| Organization name |
Ligue Contre Le Cancer
|
| Lab |
Centre de Recherche des Cordeliers
|
| Street address |
15 rue de l'école de médecine
|
| City |
Paris |
| ZIP/Postal code |
75006 |
| Country |
France |
| |
|
| Platform ID |
GPL8490 |
| Series (2) |
| GSE39198 |
Genome-scale methylome profiling of pheochromocytomas and paragangliomas with Illumina Infinium 27k Human Methylation arrays |
| GSE43298 |
Genome-scale methylome profiling of human pheochromocytomas and paragangliomas (Illumina methylation beadchips) and mouse chromaffin cells (RRBS) |
|
| Relations |
| Reanalyzed by |
GSM1060190 |
