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Sample GSM943230 Query DataSets for GSM943230
Status Public on Jul 09, 2012
Title Human Whole blood RNA 30
Sample type RNA
 
Source name schizophrenia (SCZ)_Whole blood
Organism Homo sapiens
Characteristics age: 20
gender: male
status: schizophrenia (SCZ)
tissue: Whole blood
Extracted molecule total RNA
Extraction protocol Standard Qiagen PAXgene extraction (manual and Qiacube)
Label biotin
Label protocol Standard Illumina TotalPrep kit amplification and labeling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description 4256290010_C
Data processing Data were backgroundcorrected in Beadstudio (v.3.2.3) and transformed (vst) and normalised (rsn) in Lumi (R package)
 
Submission date Jun 05, 2012
Last update date Jul 09, 2012
Contact name Simone de Jong
Organization name UCLA
Street address 695 Charles E. Young Drive south
City Los Angeles
State/province California
ZIP/Postal code 90095
Country USA
 
Platform ID GPL6883
Series (2)
GSE38481 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes [HumanRef-8 v3.0]
GSE38485 A gene co-expression network in whole blood of schizophrenia patients is independent of antipsychotic-use and enriched for brain-expressed genes

Data table header descriptions
ID_REF
VALUE Robust spline normalized
Detection

Data table
ID_REF VALUE Detection
ILMN_1762337 7.144182606 0.13078
ILMN_2055271 7.947435803 1
ILMN_2383229 7.176934768 0.22967
ILMN_1806310 7.23344644 0.44338
ILMN_1779670 7.344474083 0.71132
ILMN_2321282 8.696328449 1
ILMN_1772582 7.306796388 0.63955
ILMN_1717783 7.195775682 0.29187
ILMN_1814316 7.102228211 0.04147
ILMN_2359168 7.212095389 0.35407
ILMN_1731507 7.347115647 0.71292
ILMN_1787689 7.711774277 0.98246
ILMN_1745607 7.311931903 0.64753
ILMN_2136495 7.036939753 0.00478
ILMN_1668111 7.295298638 0.60925
ILMN_2295559 7.19828656 0.30144
ILMN_1735045 7.360420413 0.73046
ILMN_1680754 7.592033039 0.92504
ILMN_2375184 7.209584623 0.3429
ILMN_1659452 7.31450615 0.6555

Total number of rows: 24526

Table truncated, full table size 721 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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