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Sample GSM938061 Query DataSets for GSM938061
Status Public on Jun 17, 2014
Title G3361-Scrambled Rep3
Sample type RNA
Source name Melanoma cell-line, G3361, control
Organism Homo sapiens
Characteristics cell line: G3361
cell type: pigmented melanoma
Extracted molecule total RNA
Extraction protocol Qiagen miniprep kit with additional 15min on-column DNaseI digestion
Label biotin
Label protocol Refer to Dana Farber Cancer Institute Microarray Core
Hybridization protocol Refer to Dana Farber Cancer Institute Microarray Core
Scan protocol Refer to Dana Farber Cancer Institute Microarray Core
Data processing Refer to Dana Farber Cancer Institute Microarray Core
Submission date May 29, 2012
Last update date Jun 19, 2014
Contact name Markus Hermann Frank
Phone 617-919-2993
Organization name Boston Children's Hospital
Department Medicine
Lab Frank Laboratory
Street address 300 Longwood Avenue
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
Platform ID GPL571
Series (1)
GSE38290 Functional analysis of ABCB5 in melanoma cells

Data table header descriptions

Data table
AFFX-BioB-5_at 328.0 P 0.000509
AFFX-BioB-M_at 403.7 P 0.000081
AFFX-BioB-3_at 276.1 P 0.000169
AFFX-BioC-5_at 857.3 P 0.000110
AFFX-BioC-3_at 1010.9 P 0.000044
AFFX-BioDn-5_at 1397.4 P 0.000060
AFFX-BioDn-3_at 4506.7 P 0.000297
AFFX-CreX-5_at 12619.5 P 0.000052
AFFX-CreX-3_at 14021.8 P 0.000044
AFFX-DapX-5_at 13.3 A 0.123572
AFFX-DapX-M_at 2.2 A 0.834160
AFFX-DapX-3_at 2.8 A 0.941556
AFFX-LysX-5_at 7.8 A 0.368438
AFFX-LysX-M_at 1.5 A 0.910522
AFFX-LysX-3_at 0.7 A 0.686277
AFFX-PheX-5_at 2.6 A 0.737173
AFFX-PheX-M_at 0.9 A 0.976071
AFFX-PheX-3_at 15.2 A 0.672921
AFFX-ThrX-5_at 2.2 A 0.860518
AFFX-ThrX-M_at 4.9 A 0.712257

Total number of rows: 22277

Table truncated, full table size 594 Kbytes.

Supplementary file Size Download File type/resource
GSM938061_G3361_SCR3.CEL.gz 2.2 Mb (ftp)(http) CEL
GSM938061_MF2010021825.EXP.gz 377 b (ftp)(http) EXP
GSM938061_MF2010021825.TXT.gz 234.3 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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