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Sample GSM938059 Query DataSets for GSM938059
Status Public on Jun 17, 2014
Title G3361-Scrambled Rep1
Sample type RNA
Source name Melanoma cell-line, G3361, control
Organism Homo sapiens
Characteristics cell line: G3361
cell type: pigmented melanoma
Extracted molecule total RNA
Extraction protocol Qiagen miniprep kit with additional 15min on-column DNaseI digestion
Label biotin
Label protocol Refer to Dana Farber Cancer Institute Microarray Core
Hybridization protocol Refer to Dana Farber Cancer Institute Microarray Core
Scan protocol Refer to Dana Farber Cancer Institute Microarray Core
Data processing Refer to Dana Farber Cancer Institute Microarray Core
Submission date May 29, 2012
Last update date Jun 19, 2014
Contact name Markus Hermann Frank
Phone 617-919-2993
Organization name Boston Children's Hospital
Department Medicine
Lab Frank Laboratory
Street address 300 Longwood Avenue
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
Platform ID GPL571
Series (1)
GSE38290 Functional analysis of ABCB5 in melanoma cells

Data table header descriptions

Data table
AFFX-BioB-5_at 355.3 P 0.000662
AFFX-BioB-M_at 557.4 P 0.000052
AFFX-BioB-3_at 329.9 P 0.000110
AFFX-BioC-5_at 1168.3 P 0.000095
AFFX-BioC-3_at 1189.6 P 0.000044
AFFX-BioDn-5_at 1838.2 P 0.000052
AFFX-BioDn-3_at 4959.5 P 0.000195
AFFX-CreX-5_at 18128.9 P 0.000060
AFFX-CreX-3_at 16894.3 P 0.000044
AFFX-DapX-5_at 1.6 A 0.485110
AFFX-DapX-M_at 9.9 A 0.485110
AFFX-DapX-3_at 8.1 A 0.772364
AFFX-LysX-5_at 2.5 A 0.559354
AFFX-LysX-M_at 2.3 A 0.910522
AFFX-LysX-3_at 6.0 A 0.205651
AFFX-PheX-5_at 1.2 A 0.981719
AFFX-PheX-M_at 1.1 A 0.904333
AFFX-PheX-3_at 8.4 A 0.749204
AFFX-ThrX-5_at 5.4 A 0.760937
AFFX-ThrX-M_at 1.6 A 0.927300

Total number of rows: 22277

Table truncated, full table size 595 Kbytes.

Supplementary file Size Download File type/resource
GSM938059_G3361_SCR1.CEL.gz 2.2 Mb (ftp)(http) CEL
GSM938059_MF2010021823.EXP.gz 376 b (ftp)(http) EXP
GSM938059_MF2010021823.TXT.gz 234.6 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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