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Sample GSM938053 Query DataSets for GSM938053
Status Public on Jun 17, 2014
Title A375-Vector Rep1
Sample type RNA
Source name Melanoma cell-line, A375, control
Organism Homo sapiens
Characteristics cell line: A375
cell type: non-pigmented melanoma
Extracted molecule total RNA
Extraction protocol Qiagen miniprep kit with additional 15min on-column DNaseI digestion
Label biotin
Label protocol Refer to Dana Farber Cancer Institute Microarray Core
Hybridization protocol Refer to Dana Farber Cancer Institute Microarray Core
Scan protocol Refer to Dana Farber Cancer Institute Microarray Core
Data processing Refer to Dana Farber Cancer Institute Microarray Core
Submission date May 29, 2012
Last update date Jun 19, 2014
Contact name Markus Hermann Frank
Phone 617-919-2993
Organization name Boston Children's Hospital
Department Medicine
Lab Frank Laboratory
Street address 300 Longwood Avenue
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
Platform ID GPL571
Series (1)
GSE38290 Functional analysis of ABCB5 in melanoma cells

Data table header descriptions

Data table
AFFX-BioB-5_at 426.9 P 0.000169
AFFX-BioB-M_at 700.8 P 0.000044
AFFX-BioB-3_at 455.3 P 0.000070
AFFX-BioC-5_at 1345.7 P 0.000081
AFFX-BioC-3_at 1652.1 P 0.000044
AFFX-BioDn-5_at 2495.5 P 0.000044
AFFX-BioDn-3_at 6067.4 P 0.000081
AFFX-CreX-5_at 17963.4 P 0.000052
AFFX-CreX-3_at 18364.6 P 0.000044
AFFX-DapX-5_at 1.4 A 0.699394
AFFX-DapX-M_at 10.5 A 0.313723
AFFX-DapX-3_at 1.1 A 0.957038
AFFX-LysX-5_at 0.5 A 0.941556
AFFX-LysX-M_at 2.8 A 0.876428
AFFX-LysX-3_at 8.4 A 0.131361
AFFX-PheX-5_at 0.8 A 0.945802
AFFX-PheX-M_at 1.1 A 0.953518
AFFX-PheX-3_at 9.3 A 0.544587
AFFX-ThrX-5_at 16.9 A 0.617411
AFFX-ThrX-M_at 2.0 A 0.659339

Total number of rows: 22277

Table truncated, full table size 594 Kbytes.

Supplementary file Size Download File type/resource
GSM938053_A375_V1.CEL.gz 2.1 Mb (ftp)(http) CEL
GSM938053_MF2010021817.EXP.gz 370 b (ftp)(http) EXP
GSM938053_MF2010021817.TXT.gz 233.2 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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