GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM92797
Query DataSets for GSM92797
Status
Public on Jul 01, 2006
Title
PBMCs from an HIV negative mother in Botswana (11)
Sample type
RNA
Source name
Human peripheral blood mononuclear cells (PBMCs) from an HIV negative Batswana woman
Organism
Homo sapiens
Characteristics
Botswana mother between 18 and 38 years old. HIV negative.
Extracted molecule
total RNA
Label
Biotin
Description
HIV seronegative
Data processing
Data scaled with GCOS
Submission date
Jan 17, 2006
Last update date
Sep 13, 2006
Contact name
Monty Montano
E-mail(s)
mmontano@bu.edu
Phone
617 414-4806
Fax
617 414-3561
URL
http://www.bmc.org/HIV-AIDS/MontyMontano.htm
Organization name
Boston Medical Center
Department
Medicine
Lab
Center for HIV-1/AIDS Care and Research
Street address
650 Albany Street, Bldg X, room 640
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platform ID
GPL571
Series (1)
GSE4124
Gene-expression profiling of HIV-1 infection and perinatal transmission in Botswana
Data table header descriptions
ID_REF
VALUE
GCOS scaled intensity values
DETECTION_P-VALUE
Quality of measurement
ABS_CALL
Present, absent or marginal call
SCALED_VALUE
Scaled intensity values
Data table
ID_REF
VALUE
DETECTION_P-VALUE
ABS_CALL
SCALED_VALUE
1007_s_at
8.3
0.602006
A
95.5
1053_at
9.7
0.035163
P
112.2
117_at
83.7
0.000959
P
965.1
121_at
37.1
0.017001
P
428.4
1255_g_at
3
0.541184
A
34.8
1294_at
129.7
0.000673
P
1496.7
1316_at
11.9
0.001602
P
137.8
1320_at
1.8
0.810313
A
20.8
1405_i_at
1412.9
0.000491
P
16298.7
1431_at
0.4
0.438351
A
5.1
1438_at
1.2
0.67917
A
13.8
1487_at
41.8
0.066865
A
481.9
1494_f_at
15.6
0.150487
A
180.3
1598_g_at
54
0.021866
P
623.2
160020_at
18.5
0.127645
A
213.5
1729_at
78.5
0.001602
P
905.6
177_at
2.5
0.35869
A
28.3
1773_at
2
0.660442
A
22.6
179_at
46.9
0.284747
A
541.4
1861_at
17.6
0.081337
A
203.2
Total number of rows:
22277
Table truncated, full table size
690 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
