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Sample GSM923574 Query DataSets for GSM923574
Status Public on Apr 30, 2012
Title PSU_ChipSeq_MEL_Input
Sample type SRA
Source name MEL
Organism Mus musculus
Characteristics lab: PSU-m
lab description: Hardison - Penn State University
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: MEL
cell organism: mouse
cell description: Leukemia (K562 analog)
cell sex: U
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
age: immortalized
age description: Immortal cells
control: Input
control description: Control signal which may be subtracted from experimental raw signal before peaks are called.
controlid: wgEncodeEM001929
replicate: 1
strain: C57BL/6
strain description: C57 black 6, the most common inbred strain of laboratory mouse
Biomaterial provider Weissman lab
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Apr 27, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9250
Series (2)
GSE36029 Transcription Factor Binding Sites by ChIP-seq from ENCODE/PSU
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
SRA SRX145054
BioSample SAMN00990259
Named Annotation GSM923574_mm9_wgEncodePsuTfbsMelInputUImmortalC57bl6InputRepSignalRep1.bigWig
Named Annotation GSM923574_mm9_wgEncodePsuTfbsMelInputUImmortalC57bl6InputRepSignalRep2.bigWig
Named Annotation GSM923574_mm9_wgEncodePsuTfbsMelInputUImmortalC57bl6InputSig.bigWig

Supplementary file Size Download File type/resource
GSM923574_mm9_wgEncodePsuTfbsMelInputUImmortalC57bl6InputRepSignalRep1.bigWig 988.6 Mb (ftp)(http) BIGWIG
GSM923574_mm9_wgEncodePsuTfbsMelInputUImmortalC57bl6InputRepSignalRep2.bigWig 5.1 Gb (ftp)(http) BIGWIG
GSM923574_mm9_wgEncodePsuTfbsMelInputUImmortalC57bl6InputSig.bigWig 5.3 Gb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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