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Sample GSM88997 Query DataSets for GSM88997
Status Public on Dec 22, 2005
Title Lung - 31579
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.0
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 36-40
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 60
Presenting Symptoms: Persistent Cough
Workplace or household smokers?: Yes
Pathological T: 2
Pathological N: 0
Pathological M: 0
Pathological Stage: 1B
Pathological Grade: 3
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: No
Primary Site: Lung
Histology: Adenocarcinoma, NOS
 
Submission date Dec 22, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2154.9 P 0.000754
AFFX-BioB-M_at 3484.9 P 5.2e-005
AFFX-BioB-3_at 2042.6 P 7e-005
AFFX-BioC-5_at 6174.2 P 4.4e-005
AFFX-BioC-3_at 6941.6 P 4.4e-005
AFFX-BioDn-5_at 15457.5 P 4.4e-005
AFFX-BioDn-3_at 19096.6 P 4.4e-005
AFFX-CreX-5_at 60203.6 P 4.4e-005
AFFX-CreX-3_at 64150 P 4.4e-005
AFFX-DapX-5_at 3733.3 P 6e-005
AFFX-DapX-M_at 8731.8 P 5.2e-005
AFFX-DapX-3_at 15180.9 P 4.4e-005
AFFX-LysX-5_at 370.8 P 0.000147
AFFX-LysX-M_at 1172.3 P 0.001102
AFFX-LysX-3_at 2194.4 P 4.4e-005
AFFX-PheX-5_at 742.3 P 4.4e-005
AFFX-PheX-M_at 1336.7 P 0.000297
AFFX-PheX-3_at 1747.6 P 4.4e-005
AFFX-ThrX-5_at 1024.4 P 8.1e-005
AFFX-ThrX-M_at 1917.6 P 4.4e-005

Total number of rows: 54675

Table truncated, full table size 1456 Kbytes.




Supplementary file Size Download File type/resource
GSM88997.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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