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Sample GSM88959 Query DataSets for GSM88959
Status Public on Dec 22, 2005
Title Lung - 101138
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.2
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 36-40
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 14
Workplace or household smokers?: No
Pathological T: 1
Pathological N: 0
Pathological Grade: 4
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: No
Primary Site: Lung
Histology: Large cell carcinoma
 
Submission date Dec 22, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2060.2 P 0.000258
AFFX-BioB-M_at 2973.5 P 4.4e-005
AFFX-BioB-3_at 1973.5 P 4.4e-005
AFFX-BioC-5_at 5277.5 P 4.4e-005
AFFX-BioC-3_at 6298.8 P 4.4e-005
AFFX-BioDn-5_at 11885.8 P 4.4e-005
AFFX-BioDn-3_at 20749 P 4.4e-005
AFFX-CreX-5_at 61743.4 P 5.2e-005
AFFX-CreX-3_at 70026.3 P 4.4e-005
AFFX-DapX-5_at 2935.7 P 5.2e-005
AFFX-DapX-M_at 5244.1 P 0.000169
AFFX-DapX-3_at 7372.4 P 5.2e-005
AFFX-LysX-5_at 338.6 P 0.00011
AFFX-LysX-M_at 556.1 P 0.000446
AFFX-LysX-3_at 1247.2 P 4.4e-005
AFFX-PheX-5_at 389.7 P 5.2e-005
AFFX-PheX-M_at 680.1 P 9.5e-005
AFFX-PheX-3_at 697.6 P 0.000169
AFFX-ThrX-5_at 715.7 P 9.5e-005
AFFX-ThrX-M_at 1131.8 P 4.4e-005

Total number of rows: 54675

Table truncated, full table size 1453 Kbytes.




Supplementary file Size Download File type/resource
GSM88959.CEL.gz 8.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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