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Sample GSM879451 Query DataSets for GSM879451
Status Public on Jan 31, 2013
Title PC3-GFP-rep 1
Sample type RNA
 
Source name PC3-GFP cells
Organism Homo sapiens
Characteristics cell line: PC3
transgene: GFP
Growth protocol RPMI + 10%FBS + 1% pen-strep
Extracted molecule total RNA
Extraction protocol Qiagene RNeasy kit with genomic DNA elimination following kit protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol standard Illumina Ref8 BeadChip protocol
 
Hybridization protocol standard Illumina Ref8 BeadChip protocol
Scan protocol standard Illumina Ref8 BeadChip protocol
Description PC3 cells expressing GFP control -rep 1
Data processing standard Illumina Ref8 BeadChip protocol
 
Submission date Feb 23, 2012
Last update date Jan 31, 2013
Contact name Wenliang Li
Organization name University of Texas at Houston
Department Brown Foundation Institute of Molecular Medicine
Street address 1825 Pressler Street
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL6883
Series (1)
GSE36022 Genes regulated by GRK3 in PC3 prostate cancer cells

Data table header descriptions
ID_REF
VALUE average normalization algorithm
PC3-GFP-1.Detection Pval

Data table
ID_REF VALUE PC3-GFP-1.Detection Pval
ILMN_1762337 136.6 0.0256
ILMN_2055271 97.5 0.08434
ILMN_2383229 80.9 0.19578
ILMN_1806310 77.8 0.23795
ILMN_1779670 82.4 0.18072
ILMN_1717783 59.7 0.78765
ILMN_1814316 64.1 0.59036
ILMN_2359168 68.7 0.4247
ILMN_1731507 52 0.98494
ILMN_1787689 87.3 0.13705
ILMN_1745607 55.2 0.93524
ILMN_2136495 55.6 0.92771
ILMN_1668111 58.5 0.83584
ILMN_2295559 67.6 0.4503
ILMN_1735045 65.3 0.53163
ILMN_1680754 113 0.04217
ILMN_2375184 79.1 0.22139
ILMN_1659452 90.2 0.11446
ILMN_1767388 77.9 0.23494
ILMN_1675204 50.3 0.99096

Total number of rows: 24526

Table truncated, full table size 585 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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