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GEO accession:
Sample GSM855961
Query DataSets for GSM855961
Status
Public on Mar 01, 2012
Title
Pediatric_GBM_43
Sample type
RNA
Source name
Primary brain tumor tissue
Organism
Homo sapiens
Characteristics
disease state: paediatric glioblastoma
age: 16
gender: F
h3.3_status: wt
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
biotin
Label protocol
Affymetrix protocol
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
Gene expression data from a primary pediatric glioblastoma
Data processing
Normalization according to MAS5.0 algorithm. Only probesets called present in at least one sample were included
Submission date
Jan 03, 2012
Last update date
Mar 01, 2012
Contact name
Marcel Kool
E-mail(s)
m.kool@dkfz.de
Phone
00496221424636
Organization name
German Cancer Research Center
Department
Pediatric Neuro Oncology
Street address
Im Neuenheimer Feld 580
City
Heidelberg
ZIP/Postal code
69120
Country
Germany
Platform ID
GPL570
Series (1)
GSE34824
Frequent driver mutations in histone H3.3 and chromatin remodeling genes in paediatric glioblastoma
Data table header descriptions
ID_REF
VALUE
MAS5.0 signal intensity
Data table
ID_REF
VALUE
1552829_at
15.7
1552867_at
29.5
1552972_at
0.1
1552976_at
20.6
1553269_at
35.1
1553275_s_at
14
1553538_s_at
5454.3
1553547_at
10
1553569_at
5813.6
1553570_x_at
5749.3
1553575_at
228.2
1553979_at
978.5
1554007_at
344.2
1554043_a_at
38.8
1554103_at
15.1
1554108_at
40.4
1554220_a_at
8.8
1554224_at
1.4
1554225_a_at
17.5
1554266_at
26.8
Total number of rows:
40777
Table truncated, full table size
630 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM855961.CEL.gz
5.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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