GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM80738
Query DataSets for GSM80738
Status
Public on Mar 30, 2006
Title
lymph_nodes_4
Sample type
RNA
Source name
lymph_nodes
Organism
Homo sapiens
Characteristics
Normal tissue
Extracted molecule
total RNA
Extraction protocol
Total RNA extracted using standard Trizol protocol, followed by Qiagen RNeasy column clean-up
Label
biotin
Label protocol
Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
lymph_nodes_4
Data processing
RMA
Submission date
Oct 28, 2005
Last update date
Aug 28, 2018
Contact name
Richard B Roth
E-mail(s)
rroth@neurocrine.com
Organization name
Neurocrine Biosciences, Inc.
Department
Molecular Medicine
Street address
12790 El Camino Real
City
San Diego
State/province
CA
ZIP/Postal code
92130
Country
USA
Platform ID
GPL570
Series (1)
GSE3526
Comparison of gene expression profiles across the normal human body
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
Affymetrix U133 plus 2.0 array
VALUE
RMA
Data table
ID_REF
VALUE
1007_s_at
189.90607
1053_at
58.13426
117_at
89.42831
121_at
204.42574
1255_g_at
13.54527
1294_at
298.26428
1316_at
75.77976
1320_at
29.04496
1405_i_at
127.68959
1431_at
22.794716
1438_at
67.55723
1487_at
111.64455
1494_f_at
52.904892
1552256_a_at
301.6282
1552257_a_at
93.21239
1552258_at
38.66679
1552261_at
34.144417
1552263_at
60.260376
1552264_a_at
58.595882
1552266_at
24.038225
Total number of rows:
54613
Table truncated, full table size
1090 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM80738.CEL.gz
7.9 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|