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Sample GSM789250 Query DataSets for GSM789250
Status Public on Jan 05, 2012
Title 252665511344-1
Sample type RNA
 
Source name Mantle cell lymphoma
Organism Mus musculus
Characteristics tissue: Lymph node
amount in (µg): 0.2
origin: Mantle cell lymphoma
genotype: c-myc-3'RR/p53+/-
strain: Black 6
developmental stage: Mature B cell
disease: Lymphoma
rin number: 10
Extracted molecule total RNA
Extraction protocol Chomzynski, total RNA extraction
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
 
Hybridization protocol Agilent : 1650.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description 252665511344-1
Data processing Feature extraction data processing. Quantile interslide normalization.
 
Submission date Sep 01, 2011
Last update date Jan 05, 2012
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL10333
Series (1)
GSE31814 c-myc-3'RR/p53+/- mice lymphomas

Data table header descriptions
ID_REF
VALUE log2 normalized signal

Data table
ID_REF VALUE
12 8.578684499
13 5.998007197
14 6.057721846
15 7.209170875
16 12.37931842
17 13.4147519
18 5.86681602
19 6.276368655
20 6.452083132
21 5.703461195
22 8.922366199
23 15.45680409
24 9.41484267
25 10.01389196
26 5.86681602
27 14.8405625
28 9.607977003
30 8.654630542
31 12.48556043
32 5.883661594

Total number of rows: 43209

Table truncated, full table size 744 Kbytes.




Supplementary file Size Download File type/resource
GSM789250_252665511344_201105261127_S01_GE1_107_Sep09_1_1.txt.gz 9.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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