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Sample GSM769036 Query DataSets for GSM769036
Status Public on Jul 30, 2011
Title LICR_ChipSeq_Spleen_H3K4me3_adult-8wks
Sample type SRA
Source name Spleen
Organism Mus musculus
Characteristics lab: LICR-m
lab description: Ren - Ludwig Institue for Cancer Research
datatype: ChipSeq
datatype description: ChIP-Seq
cell: Spleen
cell organism: mouse
cell description: Spleen
cell sex: M
antibody: H3K4me3
antibody antibodydescription: rabbit polyclonal
antibody targetdescription: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.
antibody vendorname: Millipore
antibody vendorid: 07-473
age: adult-8wks
age description: Adult 8 weeks
control: std
control description: Standard input signal for most experiments.
controlid: Spleen/Input/std
labversion: 09/19/10 Lane 8D
replicate: 1
replicate description: tier 1
softwareversion: Bowtie
strain: C57BL/6
strain description: C57 black 6, the most common inbred strain of laboratory mouse
Biomaterial provider LICR lab
Growth protocol Spleen_Ren_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
Data processing
Submission date Jul 29, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL13112
Series (2)
GSE31039 Histone Modifications by ChIP-seq from ENCODE/LICR
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
SRA SRX085459
BioSample SAMN00690351
Named Annotation GSM769036_wgEncodeLicrHistoneSpleenH3k4me3MAdult8wksC57bl6StdSig.bigWig

Supplementary file Size Download File type/resource
GSM769036_wgEncodeLicrHistoneSpleenH3k4me3MAdult8wksC57bl6StdPk.broadPeak.gz 232.5 Kb (ftp)(http) BROADPEAK
GSM769036_wgEncodeLicrHistoneSpleenH3k4me3MAdult8wksC57bl6StdSig.bigWig 33.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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