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Sample GSM763503 Query DataSets for GSM763503
Status Public on Jan 30, 2012
Title Patient P4 @NL
Sample type RNA
 
Source name Patient P4 @NL
Organism Homo sapiens
Characteristics patient: P4
group: NL
tissue: skin
treatment: efalizumab
disease state: psoriasis
time: baseline
disease status: non-lesional
Extracted molecule total RNA
Extraction protocol Whole skin punch biopsies were homogenized in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA).
Label biotin
Label protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
 
Hybridization protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Jul 19, 2011
Last update date Apr 04, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) mayte.suarezfarinas@mssm.edu
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE30768 Post-therapeutic relapse of psoriasis associated with CD11a blockade is associated with T cells and inflammatory myeloid DCs

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 8.949698355
1053_at 5.971244977
117_at 3.676925546
121_at 5.404070694
1255_g_at 2.1752396
1294_at 3.856407532
1316_at 5.784358485
1320_at 2.194818072
1405_i_at 5.316738831
1431_at 3.923970429
1438_at 2.370299027
1487_at 6.386714372
1494_f_at 2.1752396
1598_g_at 9.949941154
160020_at 5.777265754
1729_at 7.397949162
177_at 4.357557119
1773_at 2.1752396
179_at 2.1752396
1861_at 3.684941497

Total number of rows: 22277

Table truncated, full table size 485 Kbytes.




Supplementary file Size Download File type/resource
GSM763503_Chip2_P4_NL.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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