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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Aug 22, 2011 |
| Title |
CP-2-2 |
| Sample type |
SRA |
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| Source name |
Cortical plate, sample2
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| Organism |
Mus musculus |
| Characteristics |
strain: C57BL/6
tissue origin: cerebral cortex
embryonic zone: cortical plate
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| Extracted molecule |
total RNA |
| Extraction protocol |
standard Illumina mRNAseq library prep
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| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina Genome Analyzer IIx |
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| Data processing |
mapping reads was performed using bowtie-0.12.3 and cufflinks-0.8.3
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| Submission date |
Jul 18, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Albert E. Ayoub |
| Organization name |
Yale University
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| Department |
Neurobiology
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| Street address |
333 Cedar St. SHM C317
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| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06460 |
| Country |
USA |
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| Platform ID |
GPL11002 |
| Series (1) |
| GSE30765 |
Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA-sequencing |
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| Relations |
| SRA |
SRX084363 |
| BioSample |
SAMN00672492 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSM763483_s2-cp-rep2.SAM.gz |
504.0 Mb |
(ftp)(http) |
SAM |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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