|
| Status |
Public on Aug 22, 2011 |
| Title |
SVZ-IZ-1-1 |
| Sample type |
SRA |
| |
|
| Source name |
Subventricular and intermediate zone, sample1
|
| Organism |
Mus musculus |
| Characteristics |
strain: C57BL/6
tissue origin: cerebral cortex
embryonic zone: subventricular and intermediate zone
|
| Extracted molecule |
total RNA |
| Extraction protocol |
standard Illumina mRNAseq library prep
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina Genome Analyzer IIx |
| |
|
| Data processing |
mapping reads was performed using bowtie-0.12.3 and cufflinks-0.8.3
|
| |
|
| Submission date |
Jul 18, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Albert E. Ayoub |
| Organization name |
Yale University
|
| Department |
Neurobiology
|
| Street address |
333 Cedar St. SHM C317
|
| City |
New Haven |
| State/province |
CT |
| ZIP/Postal code |
06460 |
| Country |
USA |
| |
|
| Platform ID |
GPL11002 |
| Series (1) |
| GSE30765 |
Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA-sequencing |
|
| Relations |
| SRA |
SRX084358 |
| BioSample |
SAMN00672487 |
