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Sample GSM69900 Query DataSets for GSM69900
Status Public on Oct 26, 2005
Title Methylation profiling of triple mutant (DRM1/2-CMT3)-3 using Msp I enzyme on spot array
Sample type genomic
 
Channel 1
Source name whole plant (5 weeks old)
Organism Arabidopsis thaliana
Characteristics Ecotype: LER
Age: 5 weeks old
Tissue: whole plant of LER wild type
Extracted molecule genomic DNA
Label cy3
 
Channel 2
Source name whole plant (5 weeks old)
Organism Arabidopsis thaliana
Characteristics Ecotype: LER
Age: 5 weeks old
Tissue: whole plant of DRM1/2-CMT3 mutant
Extracted molecule genomic DNA
Label cy5
 
 
Description No additional information
Data processing Median-centered normalization of log2 ratios
 
Submission date Aug 15, 2005
Last update date Oct 26, 2005
Contact name Robert Tran
E-mail(s) rtran@fhcrc.org
Organization name Fred Hutchinson cancer research center
Street address 1100 Fairview Ave N; A1-111
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL2726
Series (1)
GSE3109 Chromatin and siRNA pathways cooperate to maintain DNA methylation

Data table header descriptions
ID_REF
VALUE normalized log2 ratio

Data table
ID_REF VALUE
381486.1 0.9675
381486.2 0.9955
911506.1 0.1935
911506.2 0.1875
2102524.1 0.1065
2102524.2 0.0265
2429226.1 0.1625
2429226.2 0.0795
3642086.1 -0.3975
3642086.2 -0.3865
3891813.1 0.0585
3891813.2 -0.0175
4794374.1 -0.1755
4794374.2 -0.1275
5031770.1 0.3025
5031770.2 0.3485
5627643.1 -0.0275
5627643.2 0.0205
6055621.1 0.2685
6055621.2 0.1635

Total number of rows: 1932

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided

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