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Sample GSM69873 Query DataSets for GSM69873
Status Public on Oct 26, 2005
Title Methylation profiling of Domain Rearrange Methylase (DRM1/2)-1R using Msp I enzyme on spot array
Sample type genomic
 
Channel 1
Source name whole plant (5 weeks old)
Organism Arabidopsis thaliana
Characteristics Ecotype: WS
Age: 5 weeks old
Tissue: whole plant of WS wild type
Extracted molecule genomic DNA
Label cy5
 
Channel 2
Source name whole plant (5 weeks old)
Organism Arabidopsis thaliana
Characteristics Ecotype: WS
Age: 5 weeks old
Tissue: whole plant of DRM1/2 mutant
Extracted molecule genomic DNA
Label cy3
 
 
Description No additional information
Data processing Median-centered normalization of log2 ratios
 
Submission date Aug 15, 2005
Last update date Oct 26, 2005
Contact name Robert Tran
E-mail(s) rtran@fhcrc.org
Organization name Fred Hutchinson cancer research center
Street address 1100 Fairview Ave N; A1-111
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL2726
Series (1)
GSE3109 Chromatin and siRNA pathways cooperate to maintain DNA methylation

Data table header descriptions
ID_REF
VALUE normalized log2 ratio

Data table
ID_REF VALUE
381486.1 -1.866
381486.2 -1.931
911506.1 -0.936
911506.2 -0.885
2102524.1 -0.018
2102524.2 0.013
2429226.1 -0.162
2429226.2 -0.193
3642086.1 0.17
3642086.2 0.125
3891813.1 -0.012
3891813.2 0.002
4794374.1 0.139
4794374.2 0.0720000000000004
5031770.1 -0.028
5031770.2 -0.132
5627643.1 -0.331
5627643.2 -0.381
6055621.1 -0.15
6055621.2 -0.258

Total number of rows: 1932

Table truncated, full table size 34 Kbytes.




Supplementary data files not provided

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