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Sample GSM683853 Query DataSets for GSM683853
Status Public on Mar 01, 2011
Title Myers_MCF10A-Er-Src_1_TAM_1uM_36hr_Stanford
Sample type SRA
Source name MCF10A-Er-Src
Organism Homo sapiens
Characteristics cell: MCF10A-Er-Src
cell organism: Human
cell description: mammary gland, non-tumorigenic epithelial, inducible cell line
cell karyotype: stable and near-diploid
cell lineage: derived from the MCF-10A parental cells and contain ER-Src, a derivative of the Src kinase oncoprotein (v-Src) that is fused to the ligand-binding domain of the estrogen receptor (ER)
cell sex: F
replicate: 1
treatment: TAM_1uM_36hr
treatment description: 36h, 1uM tamoxifen (Myers)
obtainedby: Stanford
Biomaterial provider Struhl laboratory
Growth protocol Cells were grown according to ENCODE cell culture protocols:
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see:
Library strategy Bisulfite-Seq
Library source genomic
Library selection Reduced Representation
Instrument model Illumina Genome Analyzer IIx
Description Reduced Representation
Data processing For data processing details see:
Submission date Mar 01, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL10999
Series (1)
GSE27584 DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha
SRA SRX066350
BioSample SAMN00621831

Supplementary file Size Download File type/resource
GSM683853_hg19_wgEncodeHaibMethylRrbsMcf10aesTamStanfordSitesRep1.bedRrbs.gz 12.9 Mb (ftp)(http) BEDRRBS
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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