|
| Status |
Public on Mar 23, 2011 |
| Title |
HepG2-r2 |
| Sample type |
RNA |
| |
|
| Source name |
cultured HepG2 cells
|
| Organism |
Homo sapiens |
| Characteristics |
cell line: HepG2
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Cells were lysed and RNA extracted using Qiagen Rneasy kit
|
| Label |
biotin
|
| Label protocol |
standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
standard Affymetrix protocol
|
| Scan protocol |
standard Affymetrix protocol
|
| Data processing |
Data were processed using GenePattern and the Robust Multichip Average (RMA) method; quantile normalization; background correction; normalization by median scaling.
|
| |
|
| Submission date |
Dec 27, 2010 |
| Last update date |
Mar 23, 2011 |
| Contact name |
Jason Ernst |
| E-mail(s) |
jason.ernst@ucla.edu
|
| Organization name |
UCLA
|
| Department |
Biological Chemistry
|
| Street address |
615 Charles E Young Dr South
|
| City |
Los Angeles |
| State/province |
CA |
| ZIP/Postal code |
90095 |
| Country |
USA |
| |
|
| Platform ID |
GPL3921 |
| Series (2) |
| GSE26312 |
Mapping and analysis of chromatin state dynamics in nine human cell types (gene expression) |
| GSE26386 |
Systematic determination and analysis of chromatin state dynamics in nine human cell types |
|
