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Sample GSM634724 Query DataSets for GSM634724
Status Public on Mar 16, 2011
Title NonLonely 5412581001_E
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 0
age: 57
female: 1
black: 0
hispanic: 0
married: 1
logincome: 11.37939407
bmi: 30.28798103
granpct: 58
lymphpct: 32
monopct: 7
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5412581001_E.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 257.46
ILMN_1660305 911.167
ILMN_1762337 151.479
ILMN_2055271 181.679
ILMN_1814316 156.003
ILMN_1745607 147.147
ILMN_2136495 140.5
ILMN_2295559 143.423
ILMN_1735045 163.764
ILMN_1680754 183.1
ILMN_1675204 161.282
ILMN_1755321 263.319
ILMN_1698554 314.398
ILMN_1760414 167.659
ILMN_2061446 422.35
ILMN_1752884 161.466
ILMN_1809959 172.288
ILMN_1689211 153.94
ILMN_1653165 525.218
ILMN_1729835 148.71

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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