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Sample GSM634705 Query DataSets for GSM634705
Status Public on Mar 16, 2011
Title Lonely 5412581001_B
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 1
age: 50
female: 1
black: 0
hispanic: 1
married: 0
logincome: 11.37939407
bmi: 25.27807617
granpct: 43
lymphpct: 43
monopct: 9
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5412581001_B.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 269.65
ILMN_1660305 953.618
ILMN_1762337 165.538
ILMN_2055271 169.187
ILMN_1814316 167.578
ILMN_1745607 153.732
ILMN_2136495 129.045
ILMN_2295559 142.85
ILMN_1735045 162.264
ILMN_1680754 207.179
ILMN_1675204 149.434
ILMN_1755321 272.428
ILMN_1698554 375.282
ILMN_1760414 149.202
ILMN_2061446 404.229
ILMN_1752884 155.57
ILMN_1809959 150.173
ILMN_1689211 149.36
ILMN_1653165 647.382
ILMN_1729835 151.776

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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