|
| Status |
Public on Sep 15, 2023 |
| Title |
LP81 |
| Sample type |
RNA |
| |
|
| Source name |
FFPE tumor sample
|
| Organism |
Homo sapiens |
| Characteristics |
gender: female
tissue: primary luminal breast cancer
loco-regional recurrence: LATE
disease state: luminal breast cancer
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with miRNeasy FFPE kit (Qiagen) in accordance with the manufacture's protocol.
|
| Label |
Cy3
|
| Label protocol |
RNA from each sample was labeled according to the manufacturers recommendations (Affymetrix).
|
| |
|
| Hybridization protocol |
Standard Affymetrix hybridization protocol
|
| Scan protocol |
Standard Affymetrix scanning protocol
|
| Data processing |
Gene-level signal were derived from CEL files using sst-RMA algorithm implemente in Affymetrix Expression Console software
|
| |
|
| Submission date |
Jul 13, 2022 |
| Last update date |
Sep 15, 2023 |
| Contact name |
Loris De Cecco |
| E-mail(s) |
loris.dececco@istitutotumori.mi.it
|
| Organization name |
IRCSS Istituto Nazionale Tumori
|
| Street address |
via Venezian 1
|
| City |
Milan |
| ZIP/Postal code |
20133 |
| Country |
Italy |
| |
|
| Platform ID |
GPL23126 |
| Series (2) |
| GSE208101 |
Gene expression profile of luminal breast cancer samples from FFPE sample of primary luminal breast cancer from patient who had a loco-regional recurrence [cohort B] |
| GSE208102 |
Gene expression profile of luminal breast cancer samples from FFPE sample of primary luminal breast cancer from patient who had a loco-regional recurrence |
|
