|
Status |
Public on Sep 15, 2023 |
Title |
LP69 |
Sample type |
RNA |
|
|
Source name |
FFPE tumor sample
|
Organism |
Homo sapiens |
Characteristics |
gender: female tissue: primary luminal breast cancer loco-regional recurrence: EARLY disease state: luminal breast cancer
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with miRNeasy FFPE kit (Qiagen) in accordance with the manufacture's protocol.
|
Label |
Cy3
|
Label protocol |
RNA from each sample was labeled according to the manufacturers recommendations (Affymetrix).
|
|
|
Hybridization protocol |
Standard Affymetrix hybridization protocol
|
Scan protocol |
Standard Affymetrix scanning protocol
|
Data processing |
Gene-level signal were derived from CEL files using sst-RMA algorithm implemente in Affymetrix Expression Console software
|
|
|
Submission date |
Jul 13, 2022 |
Last update date |
Sep 15, 2023 |
Contact name |
Loris De Cecco |
E-mail(s) |
loris.dececco@istitutotumori.mi.it
|
Organization name |
IRCSS Istituto Nazionale Tumori
|
Street address |
via Venezian 1
|
City |
Milan |
ZIP/Postal code |
20133 |
Country |
Italy |
|
|
Platform ID |
GPL23126 |
Series (2) |
GSE208101 |
Gene expression profile of luminal breast cancer samples from FFPE sample of primary luminal breast cancer from patient who had a loco-regional recurrence [cohort B] |
GSE208102 |
Gene expression profile of luminal breast cancer samples from FFPE sample of primary luminal breast cancer from patient who had a loco-regional recurrence |
|