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Sample GSM592517 Query DataSets for GSM592517
Status Public on Sep 11, 2010
Title P0121-01-A289-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Training
age: 59.8
Sex: male
randomly assigned class label: 1
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 0
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 0
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 7.1082
217757_at 6.5543
1558450_at 8.2602
214440_at 9.0138
206797_at 5.1074
202376_at 7.0333
205969_at 5.5771
201511_at 9.5968
207225_at 5.7223
201000_at 11.9008
206527_at 9.1155
209459_s_at 7.2137
209460_at 6.5012
1570279_at 4.9548
1565776_at 7.8165
1565777_at 3.9867
203505_at 7.4548
203504_s_at 8.922
215869_at 5.2154
216066_at 5.0938

Total number of rows: 54675

Table truncated, full table size 952 Kbytes.




Supplementary file Size Download File type/resource
GSM592517_P0121-01-A289-U133Plus-2.CEL.gz 5.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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