NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM592487 Query DataSets for GSM592487
Status Public on Sep 11, 2010
Title P1144-01-D361-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Validation
age: 49.0
Sex: female
randomly assigned class label: 1
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 0
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 0
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 5.1243
217757_at 7.7039
1558450_at 8.0096
214440_at 8.8053
206797_at 5.868
202376_at 5.9519
205969_at 4.9978
201511_at 9.9831
207225_at 5.288
201000_at 13.0608
206527_at 9.1326
209459_s_at 5.6504
209460_at 4.7792
1570279_at 4.5394
1565776_at 7.1402
1565777_at 5.9471
203505_at 10.2166
203504_s_at 10.0546
215869_at 5.1614
216066_at 5.1384

Total number of rows: 54675

Table truncated, full table size 953 Kbytes.




Supplementary file Size Download File type/resource
GSM592487_P1144-01-D361-U133Plus-2.CEL.gz 8.7 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap