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Sample GSM592480 Query DataSets for GSM592480
Status Public on Sep 11, 2010
Title P1132-03-D485-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Validation
age: 46.0
Sex: female
randomly assigned class label: 0
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 0
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 0
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 4.8454
217757_at 8.4596
1558450_at 8.3069
214440_at 8.7836
206797_at 5.699
202376_at 6.8955
205969_at 4.0433
201511_at 10.3872
207225_at 3.6349
201000_at 11.1629
206527_at 8.2125
209459_s_at 3.577
209460_at 4.8773
1570279_at 5.0684
1565776_at 6.5735
1565777_at 3.9203
203505_at 10.334
203504_s_at 10.0681
215869_at 5.0234
216066_at 6.6064

Total number of rows: 54675

Table truncated, full table size 953 Kbytes.




Supplementary file Size Download File type/resource
GSM592480_P1132-03-D485-U133Plus-2.CEL.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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