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Sample GSM592477 Query DataSets for GSM592477
Status Public on Sep 11, 2010
Title P1121-01-D491-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Validation
age: 58.0
Sex: female
randomly assigned class label: 1
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 0
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 0
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 6.9188
217757_at 8.16
1558450_at 7.6414
214440_at 9.8817
206797_at 4.5603
202376_at 6.6801
205969_at 4.392
201511_at 11.1596
207225_at 6.8902
201000_at 12.8059
206527_at 8.0406
209459_s_at 7.4705
209460_at 6.7148
1570279_at 5.0919
1565776_at 6.3618
1565777_at 4.5489
203505_at 6.8984
203504_s_at 8.0667
215869_at 5.3922
216066_at 5.0721

Total number of rows: 54675

Table truncated, full table size 953 Kbytes.




Supplementary file Size Download File type/resource
GSM592477_P1121-01-D491-U133Plus-2.CEL.gz 4.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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