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Sample GSM592472 Query DataSets for GSM592472
Status Public on Sep 11, 2010
Title P1116-00-D453-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Validation
age: 68.0
Sex: female
randomly assigned class label: 0
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 1
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 1
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 8.4264
217757_at 8.8607
1558450_at 7.9758
214440_at 9.9278
206797_at 5.5749
202376_at 6.5258
205969_at 4.0667
201511_at 10.1038
207225_at 5.4479
201000_at 12.4306
206527_at 8.9383
209459_s_at 7.578
209460_at 5.6166
1570279_at 5.5045
1565776_at 7.782
1565777_at 5.8764
203505_at 10.4557
203504_s_at 9.8806
215869_at 5.5221
216066_at 7.4187

Total number of rows: 54675

Table truncated, full table size 952 Kbytes.




Supplementary file Size Download File type/resource
GSM592472_P1116-00-D453-U133Plus-2.CEL.gz 5.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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