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Sample GSM592457 Query DataSets for GSM592457
Status Public on Sep 11, 2010
Title P1077-02-D264-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Validation
age: 75.0
Sex: male
randomly assigned class label: 0
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 0
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 0
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 9.2042
217757_at 9.44
1558450_at 7.9088
214440_at 9.5638
206797_at 5.6787
202376_at 7.5872
205969_at 5.432
201511_at 10.4005
207225_at 5.4613
201000_at 12.7616
206527_at 9.0251
209459_s_at 5.4127
209460_at 5.2927
1570279_at 4.4297
1565776_at 7.2914
1565777_at 4.8967
203505_at 8.0208
203504_s_at 9.4383
215869_at 6.4781
216066_at 5.1676

Total number of rows: 54675

Table truncated, full table size 952 Kbytes.




Supplementary file Size Download File type/resource
GSM592457_P1077-02-D264-U133Plus-2.CEL.gz 5.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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