NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM592412 Query DataSets for GSM592412
Status Public on Sep 11, 2010
Title P0056-01-A211-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Training
age: 43.2
Sex: female
randomly assigned class label: 1
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 0
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 0
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 8.4677
217757_at 6.6953
1558450_at 7.4844
214440_at 10.0417
206797_at 3.4442
202376_at 4.1051
205969_at 6.1878
201511_at 9.8795
207225_at 4.556
201000_at 13.0036
206527_at 8.1374
209459_s_at 7.0242
209460_at 6.8293
1570279_at 4.9551
1565776_at 7.4918
1565777_at 5.3296
203505_at 10.9099
203504_s_at 10.2057
215869_at 6.4058
216066_at 5.5371

Total number of rows: 54675

Table truncated, full table size 953 Kbytes.




Supplementary file Size Download File type/resource
GSM592412_P0056-01-A211-U133Plus-2.CEL.gz 5.3 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap