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Sample GSM592407 Query DataSets for GSM592407
Status Public on Sep 11, 2010
Title P0051-01-A185-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Training
age: 53.6
Sex: male
randomly assigned class label: 1
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 1
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 1
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 2.1247
217757_at 5.9855
1558450_at 6.1122
214440_at 9.7295
206797_at 5.6046
202376_at 4.867
205969_at 4.2502
201511_at 10.1045
207225_at 3.9287
201000_at 11.9655
206527_at 7.0263
209459_s_at 3.7913
209460_at 5.0594
1570279_at 2.9732
1565776_at 6.0581
1565777_at 3.8363
203505_at 10.1849
203504_s_at 9.9923
215869_at 4.4522
216066_at 4.4168

Total number of rows: 54675

Table truncated, full table size 953 Kbytes.




Supplementary file Size Download File type/resource
GSM592407_P0051-01-A185-U133Plus-2.CEL.gz 5.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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