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Sample GSM592402 Query DataSets for GSM592402
Status Public on Sep 11, 2010
Title P0034-01-A113-U133Plus-2
Sample type RNA
 
Source name pre-treatment bone marrow
Organism Homo sapiens
Characteristics maqc_distribution_status: Training
age: 75.2
Sex: female
randomly assigned class label: 1
efs milestone outcome (24 months): 1=event occurred < 24 months, 0=no event in first 24 months: 1
os milestone outcome (24 months): 1= deceased by 24 months, 0= alive at 24 months: 1
Extracted molecule total RNA
Extraction protocol Total RNA was isolated with RNeasy Mini Kit (Qiagen, Valencia, CA).
Label biotin
Label protocol As recommended by manufacturer
 
Hybridization protocol As recommended by manufacturer
Scan protocol As recommended by manufacturer
Description MAQC-II multiple myeloma (MM) data set (endpoints F, G, H, and I)
Data processing All data used in these analyses were derived with the Affymetrix Microarray Suite GCOS1.1 software.
 
Submission date Sep 10, 2010
Last update date Sep 10, 2010
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL570
Series (2)
GSE16716 MicroArray Quality Control Phase II (MAQC-II) Project
GSE24080 MAQC-II Project: Multiple myeloma (MM) data set

Data table header descriptions
ID_REF
VALUE MAS5 log2 intensity value

Data table
ID_REF VALUE
229819_at 4.8553
217757_at 3.8171
1558450_at 6.7942
214440_at 10.5737
206797_at 4.8378
202376_at 5.3579
205969_at 4.5392
201511_at 9.5483
207225_at 6.3206
201000_at 12.9241
206527_at 8.2069
209459_s_at 7.6067
209460_at 7.11
1570279_at 4.4622
1565776_at 6.7226
1565777_at 5.7198
203505_at 10.0244
203504_s_at 9.5868
215869_at 4.4972
216066_at 6.0571

Total number of rows: 54675

Table truncated, full table size 953 Kbytes.




Supplementary file Size Download File type/resource
GSM592402_P0034-01-A113-U133Plus-2.CEL.gz 5.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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