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Sample GSM532829 Query DataSets for GSM532829
Status Public on Apr 24, 2010
Title impaired fasting glucose 3
Sample type RNA
 
Source name blood
Organism Homo sapiens
Characteristics patient type: impaired fasting glucose 3
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 3
Data processing The signal intensity was background subtracted and subsequently used for analysis
 
Submission date Apr 13, 2010
Last update date Apr 23, 2010
Contact name Kandiah Jeyaseelan
E-mail(s) erijeya@nus.edu.sg
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platform ID GPL6883
Series (2)
GSE21321 Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus.
GSE26168 Type 2 Diabetes mellitus: mRNA and miRNA profiling

Data table header descriptions
ID_REF
VALUE background subtracted signal value
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 -10.4 0.92247
ILMN_1660305 61.8 0
ILMN_1762337 -9.5 0.90823
ILMN_2055271 19 0.02532
ILMN_1814316 2.9 0.34177
ILMN_2359168 -8.6 0.87184
ILMN_1731507 -10.8 0.93354
ILMN_1787689 -1 0.5269
ILMN_1745607 -12 0.96361
ILMN_2136495 4 0.27848
ILMN_1668111 -9.1 0.89241
ILMN_2295559 0.2 0.46361
ILMN_1735045 0.9 0.43987
ILMN_1680754 18.1 0.03323
ILMN_2375184 14.7 0.04589
ILMN_1659452 12.4 0.07595
ILMN_1767388 14.7 0.0443
ILMN_1675204 -14.6 0.98734
ILMN_1673870 -2.8 0.63449
ILMN_1755321 18.5 0.03006

Total number of rows: 24526

Table truncated, full table size 556 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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