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GEO accession:
Sample GSM53141
Query DataSets for GSM53141
Status
Public on Jul 01, 2005
Title
Kidney - 3760
Sample type
RNA
Source name
Kidney
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.3
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 30
Clinical T: 3a
Clinical N: 0
Clinical M: 0
Clinical Stage: 3
Clinical Grade: 2
Primary Site: Kidney
Histology: Conventional (clear cell) renal carcinoma
Submission date
Jun 30, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
ecurley@intgen.org
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
3579.6
P
0.000662
AFFX-BioB-M_at
5411.5
P
4.4e-005
AFFX-BioB-3_at
3401
P
9.5e-005
AFFX-BioC-5_at
10418.1
P
4.4e-005
AFFX-BioC-3_at
11502.9
P
4.4e-005
AFFX-BioDn-5_at
24962
P
4.4e-005
AFFX-BioDn-3_at
39602.6
P
4.4e-005
AFFX-CreX-5_at
98574.2
P
4.4e-005
AFFX-CreX-3_at
110474.2
P
4.4e-005
AFFX-DapX-5_at
4551.6
P
7e-005
AFFX-DapX-M_at
7555.7
P
0.00011
AFFX-DapX-3_at
11672.2
P
5.2e-005
AFFX-LysX-5_at
543.4
P
7e-005
AFFX-LysX-M_at
1105.8
P
0.002867
AFFX-LysX-3_at
1958.3
P
0.00011
AFFX-PheX-5_at
571
P
6e-005
AFFX-PheX-M_at
942.2
P
0.00034
AFFX-PheX-3_at
1129.3
P
0.000297
AFFX-ThrX-5_at
899.8
P
0.000509
AFFX-ThrX-M_at
1662.9
P
4.4e-005
Total number of rows:
54675
Table truncated, full table size
1458 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM53141.CEL.gz
7.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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