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Sample GSM48596 Query DataSets for GSM48596
Status Public on Apr 21, 2005
Title R-5-cDNA-8
Sample type RNA
 
Channel 1
Source name cy3 Liver5
Organism Mus musculus
Extracted molecule total RNA
 
Channel 2
Source name cy5 Liver3
Organism Mus musculus
Extracted molecule total RNA
 
 
Description Each laboratory was provided with aliquots of two different RNA samples that were prepared in one of the Consortium laboratories - a sample prepared from mouse livers (Liver RNA), and a sample prepared from equal amounts of RNA isolated from five mouse tissues (liver, kidney, lung, brain and spleen: Pooled RNA).
 
Submission date Apr 20, 2005
Last update date May 27, 2005
Contact name Kenneth Lyon Phillips
E-mail(s) kphillips@icoria.com
Phone 919 425 3075
Organization name Paradigm Array Labs
Street address
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platform ID GPL1975
Series (1)
GSE2458 Cross-platform comparability of microarray data

Data table header descriptions
ID_REF
cy3_signal the cy3 channel signal
cy3_background the cy3 channel background signal
cy5_signal the cy5 channel signal
cy5_background the cy5 channel background signal
cy3_signal_bc the cy3 signal bc
cy5_signal_bc the cy5 signal bc
signal_ratio the signal ratio
VALUE the log signal ratio
signal_ratio_bc signal ratio bc
log_signal_ratio_bc log signal ratio bc

Data table
ID_REF cy3_signal cy3_background cy5_signal cy5_background cy3_signal_bc cy5_signal_bc signal_ratio VALUE signal_ratio_bc log_signal_ratio_bc
1 23318.275391 13956.3125 24585.023438 15507.1875 9361.962891 9077.835938 1.0543242597 0.0763186391 0.9696509208 -0.044462632
2 22713.169922 12341.09375 22092.140625 12900.09375 10372.076172 9192.046875 0.9726577444 -0.039995851 0.8862301744 -0.174246646
3 15371.821289 10346.71875 15592.787109 13199.59375 5025.102539 2393.193359 1.0143747326 0.0205907144 0.4762476667 -1.070216071
4 16695.642578 7361.3125 14056.860352 8787.59375 9334.330078 5269.266602 0.8419478487 -0.248197221 0.5645039931 -0.824944309
5 13594.024414 7918.3125 12195.125977 7018.25 5675.711914 5176.875977 0.8970946061 -0.156667958 0.9121104199 -0.132719608
6 12786.299805 8015.78125 10205.647461 6284.4375 4770.518555 3921.209961 0.7981705119 -0.325231115 0.8219672381 -0.282847203
7 13171.869141 8219.125 10729.662109 5246.1875 4952.744141 5483.474609 0.814589182 -0.29585544 1.1071588705 0.1468622548
8 20704.646484 7615.96875 15950.603516 4627.28125 13088.677734 11323.322266 0.7703876291 -0.376343558 0.8651234675 -0.209022051
9 11993.198242 8807.375 9294.270508 6662.125 3185.823242 2632.145508 0.7749618009 -0.367802896 0.8262057585 -0.275426979
10 19125.8125 8938.53125 11306.845703 4505.0625 10187.28125 6801.783203 0.5911825029 -0.758324524 0.6676740375 -0.582784153
11 14029.09668 7841.71875 8538.424805 5077 6187.37793 3461.424805 0.6086225649 -0.716380272 0.5594332275 -0.83796215
12 18985.777344 6403.34375 16230.444336 3667.28125 12582.433594 12563.163086 0.8548738375 -0.226216572 0.9984684594 -0.00221124
13 12842.942383 5869.625 8820.183594 3771 6973.317383 5049.183594 0.6867728073 -0.542095178 0.7240719613 -0.465795009
14 15289.526367 5917.125 11783.913086 2979.625 9372.401367 8804.288086 0.7707179937 -0.375725021 0.9393844482 -0.090212385
15 12179.086914 5609.875 8212.869141 3984 6569.211914 4228.869141 0.6743419436 -0.56844776 0.6437407099 -0.635448388
16 12128.086914 7709.4375 8805.029297 5275.09375 4418.649414 3529.935547 0.7260031495 -0.461952288 0.7988720571 -0.323963627
17 11930.429688 6335.65625 9328.947266 5767.84375 5594.773438 3561.103516 0.7819456222 -0.354859811 0.636505402 -0.651755337
18 12304.376953 7354.6875 10777.449219 4822.5625 4949.689453 5954.886719 0.8759036935 -0.191155842 1.2030828955 0.2667360513
19 21012.511719 14870.625 20565.101563 16230.375 6141.886719 4334.726563 0.9787074405 -0.031050427 0.7057646553 -0.502740913
20 18397.439453 13710.125 17340.144531 17121.96875 4687.314453 218.175781 0.942530322 -0.085389063 0.0465460091 -4.425198716

Total number of rows: 13824

Table truncated, full table size 1691 Kbytes.




Supplementary data files not provided

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