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Sample GSM48592 Query DataSets for GSM48592
Status Public on Apr 21, 2005
Title R-5-cDNA-4
Sample type RNA
 
Channel 1
Source name cy3 Pool
Organism Mus musculus
Extracted molecule total RNA
 
Channel 2
Source name cy5 Liver3
Organism Mus musculus
Extracted molecule total RNA
 
 
Description Each laboratory was provided with aliquots of two different RNA samples that were prepared in one of the Consortium laboratories - a sample prepared from mouse livers (Liver RNA), and a sample prepared from equal amounts of RNA isolated from five mouse tissues (liver, kidney, lung, brain and spleen: Pooled RNA).
 
Submission date Apr 20, 2005
Last update date May 27, 2005
Contact name Kenneth Lyon Phillips
E-mail(s) kphillips@icoria.com
Phone 919 425 3075
Organization name Paradigm Array Labs
Street address
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platform ID GPL1975
Series (1)
GSE2458 Cross-platform comparability of microarray data

Data table header descriptions
ID_REF
cy3_signal the cy3 channel signal
cy3_background the cy3 channel background signal
cy5_signal the cy5 channel signal
cy5_background the cy5 channel background signal
cy3_signal_bc the cy3 signal bc
cy5_signal_bc the cy5 signal bc
signal_ratio the signal ratio
VALUE the log signal ratio
signal_ratio_bc signal ratio bc
log_signal_ratio_bc log signal ratio bc

Data table
ID_REF cy3_signal cy3_background cy5_signal cy5_background cy3_signal_bc cy5_signal_bc signal_ratio VALUE signal_ratio_bc log_signal_ratio_bc
1 9620.376953 1530.0625 13032.545898 2742.84375 8090.314453 10289.702148 1.3546814186 0.4379536118 1.271854414 0.3469335384
2 8614.59375 1829.6875 11898.352539 3104.40625 6784.90625 8793.946289 1.3811855654 0.4659071619 1.2961043182 0.3741818396
3 4980.806641 1741.0625 7314.874512 2895.53125 3239.744141 4419.343262 1.4686124235 0.5544537094 1.3641025555 0.4479521127
4 6061.381836 2063.53125 8686.265625 3260.25 3997.850586 5426.015625 1.4330503935 0.5190893431 1.3572332203 0.4406686477
5 4770.439453 1475.90625 8067.20752 3176.125 3294.533203 4891.08252 1.6910826769 0.7579471947 1.4846056235 0.5700797387
6 4603.941895 1720.6875 7299.004883 2941.34375 2883.254395 4357.661133 1.585381625 0.6648301604 1.511368938 0.5958558776
7 5491.14502 1433.59375 7878.599121 2778.71875 4057.55127 5099.880371 1.4347825622 0.5208321165 1.2568862429 0.3298540815
8 16185.014648 1642.25 15943.932617 3334.21875 14542.764648 12609.713867 0.9851046146 -0.021651153 0.8670781775 -0.205766019
9 4886.772949 1651.40625 7478.90332 2759.78125 3235.366699 4719.12207 1.5304380617 0.6139446588 1.458605008 0.5445892526
10 8047.342773 1555.625 8965.101563 3040.59375 6491.717773 5924.507813 1.1140449482 0.1558074421 0.9126255977 -0.131904975
11 7313.966309 2167.78125 9275.130859 1967.03125 5146.185059 7308.099609 1.2681396751 0.3427136552 1.4201004288 0.50599296
12 17743.455078 1857.15625 28942.990234 2144.6875 15886.298828 26798.302734 1.6311924654 0.7059270166 1.6868814457 0.7543585844
13 5764.023926 1636.28125 6475.038574 2113.78125 4127.742676 4361.257324 1.1233538683 0.1678124634 1.0565719974 0.0793910794
14 12335.56543 1734.6875 11780.62793 3360.5625 10600.87793 8420.06543 0.9550132093 -0.066407407 0.7942800102 -0.3322804
15 5574.091797 1725.15625 8275.782227 3116.96875 3848.935547 5158.813477 1.4846871075 0.5701589202 1.3403221265 0.4225797726
16 5068.309082 2229.09375 8079.618164 3794.71875 2839.215332 4284.899414 1.5941447203 0.6727826066 1.5091843742 0.5937690679
17 4788.652344 1343.375 7505.995117 2379.59375 3445.277344 5126.401367 1.5674545943 0.6484236519 1.4879502737 0.5733263134
18 5251.714844 2076.28125 7387.550781 4045.40625 3175.433594 3342.144531 1.4066930518 0.4923075589 1.052500212 0.0738205239
19 6340.42041 2118 7663.270508 2589.59375 4222.42041 5073.676758 1.2086376001 0.2733817294 1.2016038825 0.2649613794
20 7110.898438 2049.4375 8173.749023 3287.375 5061.460938 4886.374023 1.1494678337 0.2009660947 0.9654078304 -0.050789566

Total number of rows: 13824

Table truncated, full table size 1679 Kbytes.




Supplementary data files not provided
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