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Sample GSM48591 Query DataSets for GSM48591
Status Public on Apr 21, 2005
Title R-5-cDNA-3
Sample type RNA
 
Channel 1
Source name cy3 Pool
Organism Mus musculus
Extracted molecule total RNA
 
Channel 2
Source name cy5 Liver3
Organism Mus musculus
Extracted molecule total RNA
 
 
Description Each laboratory was provided with aliquots of two different RNA samples that were prepared in one of the Consortium laboratories - a sample prepared from mouse livers (Liver RNA), and a sample prepared from equal amounts of RNA isolated from five mouse tissues (liver, kidney, lung, brain and spleen: Pooled RNA).
 
Submission date Apr 20, 2005
Last update date May 27, 2005
Contact name Kenneth Lyon Phillips
E-mail(s) kphillips@icoria.com
Phone 919 425 3075
Organization name Paradigm Array Labs
Street address
City Research Triangle Park
State/province NC
ZIP/Postal code 27709
Country USA
 
Platform ID GPL1975
Series (1)
GSE2458 Cross-platform comparability of microarray data

Data table header descriptions
ID_REF
cy3_signal the cy3 channel signal
cy3_background the cy3 channel background signal
cy5_signal the cy5 channel signal
cy5_background the cy5 channel background signal
cy3_signal_bc the cy3 signal bc
cy5_signal_bc the cy5 signal bc
signal_ratio the signal ratio
VALUE the log signal ratio
signal_ratio_bc signal ratio bc
log_signal_ratio_bc log signal ratio bc

Data table
ID_REF cy3_signal cy3_background cy5_signal cy5_background cy3_signal_bc cy5_signal_bc signal_ratio VALUE signal_ratio_bc log_signal_ratio_bc
1 6350.43457 801.1875 7935.806641 1101.34375 5549.24707 6834.462891 1.2496478081 0.3215215532 1.231601838 0.3005359255
2 4486.168945 1179.6875 7040.801758 1171.59375 3306.481445 5869.208008 1.5694464128 0.6502557704 1.7750615286 0.8278690333
3 3968.265625 1308.25 5035.782715 1168.78125 2660.015625 3867.001465 1.2690135165 0.3437074356 1.4537514098 0.5397805908
4 4785.744141 1368.375 6032.246582 1307.46875 3417.369141 4724.777832 1.2604615718 0.3339521348 1.3825775434 0.4673603979
5 4614.082031 924.6875 5051.357422 1171.25 3689.394531 3880.107422 1.0947697479 0.130627474 1.0516921921 0.0727125204
6 4176.782715 1148.875 4853.545898 1462.125 3027.907715 3391.420898 1.1620297797 0.2166470416 1.1200542478 0.1635686082
7 5341.584473 1570.9375 6030.555664 1602.6875 3770.646973 4427.868164 1.1289825509 0.1750231885 1.1742993167 0.2318001833
8 19762.363281 1261.34375 14481.806641 1031.1875 18501.019531 13450.619141 0.7327973095 -0.448513888 0.7270204282 -0.459932193
9 5177.801758 1401.9375 4940.285156 1751.21875 3775.864258 3189.066406 0.9541279073 -0.067745413 0.8445924398 -0.243672762
10 9898.84082 1398.90625 6869.062988 1019.65625 8499.93457 5849.406738 0.6939259973 -0.527146278 0.6881707959 -0.539161426
11 7429.806641 1427.28125 6252.37207 671.71875 6002.525391 5580.65332 0.8415255433 -0.248921032 0.9297175699 -0.105135575
12 18545.410156 1480.25 19038.134766 1000.40625 17065.160156 18037.728516 1.0265685475 0.0378299643 1.0569914581 0.0799637179
13 5339.647461 1356.9375 5116.777832 1354.21875 3982.709961 3762.559082 0.9582613589 -0.061508901 0.9447233464 -0.082036184
14 21848.435547 1581.375 18136.671875 1467.40625 20267.060547 16669.265625 0.8301130686 -0.268620238 0.8224806743 -0.281946314
15 24535.271484 3115.6875 27810.058594 2418.78125 21419.583984 25391.277344 1.1334726258 0.1807495494 1.1854234593 0.2454025136
16 9311.270508 2820.84375 9272.860352 3790.96875 6490.426758 5481.891602 0.9958748749 -0.005963606 0.8446118886 -0.24363954
17 6182.497559 1544.625 9666.144531 2933.90625 4637.872559 6732.238281 1.563469203 0.6447508015 1.4515789719 0.5376230627
18 4822.729492 1760.1875 5234.62793 1438.5625 3062.541992 3796.06543 1.0854077424 0.1182371048 1.2395145732 0.3097752335
19 4717.101563 905.90625 5471.917969 1107.78125 3811.195313 4364.136719 1.1600169926 0.214145939 1.1450834609 0.1954527548
20 6700.980469 1410.8125 7633.946777 1281.53125 5290.167969 6352.415527 1.1392283282 0.1880569261 1.2007965653 0.2639917555

Total number of rows: 13824

Table truncated, full table size 1683 Kbytes.




Supplementary data files not provided
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