|
| Status |
Public on Jan 01, 2021 |
| Title |
5PK |
| Sample type |
RNA |
| |
|
| Source name |
breast cancer_control
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: surgical breast tumor sample
gender: female
tumor stage: early breast cancer
|
| Treatment protocol |
The tissue was retrieved during breast conserving surgery.
|
| Growth protocol |
FFPE fresh frozen paraffin embedded breast cancer tissue from surgical excision
|
| Extracted molecule |
total RNA |
| Extraction protocol |
none provided by the submitter
|
| Label |
biotin
|
| Label protocol |
standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
standard Affymetrix protocol
|
| Scan protocol |
standard Affymetrix protocol
|
| Description |
breast cancer_FFPE
protein expression data from non-metastasized breast cancer patients
|
| Data processing |
R version 4.0.1, oligo version 1.52.0 (RMA), Biobase version 2.48.0, affycoretools version 1.60.1, pd.hta.2.0 version 3.12.2
|
| |
|
| Submission date |
Aug 25, 2020 |
| Last update date |
Jan 03, 2021 |
| Contact name |
Elvis Ruznic |
| E-mail(s) |
e.ruznic@salk.at
|
| Organization name |
Gemeinnützige Salzburger Landeskliniken Betriebsges.m.b.H.
|
| Department |
UK f. Radiotherapie & Radio-Onkologie
|
| Street address |
Müllner Hauptstraße 48
|
| City |
Salzburg |
| State/province |
Salzburg |
| ZIP/Postal code |
5020 |
| Country |
Austria |
| |
|
| Platform ID |
GPL17586 |
| Series (1) |
| GSE156873 |
Hsa-miR-375/RASD1 signaling predicts local control in early breast cancer |
|
