|
| Status |
Public on May 28, 2020 |
| Title |
Ps44 |
| Sample type |
genomic |
| |
|
| Source name |
Psoriasis 44
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Female
tissue: peripheral blood
disease state: psoriasis
response: ER
age: 59
age at initiation: 5
biological drug: Etanercept
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted from peripheral blood samples using the MagNa Pure® System (Roche Applied Science)
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using Illumina iScanSQ platform
|
| Description |
psoriasis peripheral blood sample
|
| Data processing |
GenomeStudio Methylation Software Module (v 1.9.0, Illumina).
Unmethylated and methylated signal intensities in supplementary file
|
| |
|
| Submission date |
May 27, 2020 |
| Last update date |
May 28, 2020 |
| Contact name |
María C Ovejero-Benito |
| Organization name |
Instituto de Investigación Sanitaria la Princesa (IIS-IP)
|
| Street address |
C DIEGO DE LEÓN 62
|
| City |
MADRID |
| State/province |
MADRID |
| ZIP/Postal code |
E28006 |
| Country |
Spain |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE151278 |
Genome-wide DNA methylation analysis of peripheral blood samples of moderate-to-severe psoriasis patients treated with anti-TNF drugs |
|
