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Sample GSM4445908 Query DataSets for GSM4445908
Status Public on Nov 16, 2020
Title ACTH Adenomas CU-2014-002
Sample type RNA
 
Source name Pituitary gland
Organism Homo sapiens
Characteristics tissue: TBX19-Tumor
Treatment protocol With no previous treatment
Growth protocol Not applicable
Extracted molecule total RNA
Extraction protocol miRNeasy (Qiagen) extraction of total RNA was performed according to the manufacturer's instructions.
Label Biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 250 ng total RNA (GeneChip WT Pico Reagent Kit, Affymetrix).
 
Hybridization protocol Following fragmentation, 5.5 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Clariom D Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix 7G GeneChip scanner.
Description ACTH Adenomas
Adenomas-CU-2014-002
ACTH Adenomas
Data processing The data was analyzed with RMA using Partek Genomic Suite default analysis settings .
 
Submission date Mar 30, 2020
Last update date Nov 16, 2020
Contact name Daniel Marrero-Rodriguez
E-mail(s) dan.mar57@gmail.com
Phone +5554401021
Organization name Instituto Mexicano del Seguro Social
Department Unidad de Investigacion Medica en Enfermedades Endocrinas
Lab Laboratorio de Endocrinologia Experimental
Street address Av. Cuauhtémoc 330, Col. Doctores
City México City
State/province México City
ZIP/Postal code 06720
Country Mexico
 
Platform ID GPL23126
Series (1)
GSE147786 Transcriptome and methylome analysis reveal three cellular origins of pituitary tumors

Data table header descriptions
ID_REF
VALUE RMA

Data table
ID_REF VALUE
TC0100006432.hg.1 4.12096
TC0100006433.hg.1 4.89078
TC0100006434.hg.1 4.30938
TC0100006435.hg.1 3.15843
TC0100006436.hg.1 3.65278
TC0100006437.hg.1 4.98952
TC0100006438.hg.1 7.40882
TC0100006439.hg.1 5.53782
TC0100006440.hg.1 3.67507
TC0100006441.hg.1 5.97563
TC0100006442.hg.1 1.96039
TC0100006443.hg.1 6.65218
TC0100006444.hg.1 4.57798
TC0100006445.hg.1 3.70469
TC0100006446.hg.1 4.95662
TC0100006447.hg.1 12.0192
TC0100006448.hg.1 7.02014
TC0100006449.hg.1 4.40759
TC0100006450.hg.1 4.70795
TC0100006451.hg.1 6.29215

Total number of rows: 135750

Table truncated, full table size 3441 Kbytes.




Supplementary file Size Download File type/resource
GSM4445908_Adenomas-CU-2014-002.CEL.gz 23.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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