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GEO accession:
Sample GSM44438
Query DataSets for GSM44438
Status
Public on Mar 05, 2005
Title
Panicle 3
Sample type
RNA
Channel 1
Source name
Panicles from heading stage (Cy5)
Organism
Oryza sativa
Extracted molecule
total RNA
Channel 2
Source name
Cultured Cells (Cy3)
Organism
Oryza sativa
Extracted molecule
total RNA
Description
Panicle vs. Cultured Cell (control sample)
Keywords = rice
Keywords = panicle
Submission date
Mar 03, 2005
Last update date
May 27, 2005
Contact name
Yuling Jiao
Organization name
California Institute of Technology
Department
Biology
Lab
Meyerowitz
Street address
1200 E California Blvd
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1722
Series (1)
GSE2358
Expression Analysis of Rice Chromosome 4 Using Tiling Microarray
Data table header descriptions
ID_REF
VALUE
Log (base 2) transform of the ratio of the normalized medians.
CY5_MEDIAN
Normalized median feature pixel intensity at wavelength 635 nm with the median background subtracted.
CY3_MEDIAN
Normalized median feature pixel intensity at wavelength 532 nm with the median background subtracted.
FLAG
The type of flag associated with a feature. An extension of GenePix 3.0 flags described at http://www.axon.com/gn_GPR_Format_History.html
Data table
ID_REF
VALUE
CY5_MEDIAN
CY3_MEDIAN
FLAG
8083le04
-0.433050534
858.3028817
1158.782082
0
8083nf08
-0.033462059
565.2803582
578.5447792
0
8083ba09
-0.64734262
431.5671001
675.955141
0
8083fh01
0.337697671
1105.742624
874.9775751
0
8084he03
0.057273161
127.2445591
122.2920659
-50
8084ff07
0.484895148
1596.556433
1140.817802
0
8084ga02
0.277556395
721.4586849
595.1941657
0
8084gc04
0.187156356
129.0909732
113.3851549
0
8034mb04
0.388424603
856.1502471
654.0674395
0
8034sb06
-0.072991605
125.6755434
132.1975585
-50
8035fe07
-0.271596011
309.7348034
373.8940497
-50
8035gc05
0.385488429
539.4390032
412.9512302
0
8035me09
0.629368311
824.3430759
532.9043366
0
8035lc05
0.095768757
1520.602379
1422.939375
0
8036da12
-0.424990657
350.2892346
470.2856489
-50
8036ia01
0.028062185
358.44668
351.5418249
0
7018lf08
-0.22198018
452.3729918
527.6177056
0
7018kd08
0.071296134
515.1341006
490.2956331
0
7018hf09
-0.172173364
855.5977952
964.0487676
0
7018oc05
0.168509499
676.7812645
602.1738801
0
Total number of rows:
14044
Table truncated, full table size
649 Kbytes
.
Supplementary data files not provided
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