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GEO accession:
Sample GSM44415
Query DataSets for GSM44415
Status
Public on Mar 05, 2005
Title
Flag Leaf 1
Sample type
RNA
Channel 1
Source name
Flag leafs from heading stage (Cy5)
Organism
Oryza sativa
Extracted molecule
total RNA
Channel 2
Source name
Cultured Cells (Cy3)
Organism
Oryza sativa
Extracted molecule
total RNA
Description
Flag Leaf vs. Cultured Cell (control sample)
Keywords = rice
Keywords = flag leaf
Submission date
Mar 03, 2005
Last update date
May 27, 2005
Contact name
Yuling Jiao
Organization name
California Institute of Technology
Department
Biology
Lab
Meyerowitz
Street address
1200 E California Blvd
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1722
Series (1)
GSE2358
Expression Analysis of Rice Chromosome 4 Using Tiling Microarray
Data table header descriptions
ID_REF
VALUE
Log (base 2) transform of the ratio of the normalized medians.
CY5_MEDIAN
Normalized median feature pixel intensity at wavelength 635 nm with the median background subtracted.
CY3_MEDIAN
Normalized median feature pixel intensity at wavelength 532 nm with the median background subtracted.
FLAG
The type of flag associated with a feature. An extension of GenePix 3.0 flags described at http://www.axon.com/gn_GPR_Format_History.html
Data table
ID_REF
VALUE
CY5_MEDIAN
CY3_MEDIAN
FLAG
8083le04
-0.714753963
822.9290743
1350.593915
0
8083nf08
-0.694193473
460.2179494
744.6232822
0
8083ba09
-0.724965711
345.2911398
570.7183802
0
8083fh01
-0.285413999
672.9196964
820.1275768
0
8084he03
-0.077338509
176.0408059
185.735346
-50
8084ff07
0.358154531
1368.038546
1067.291565
0
8084ga02
0.179875038
1009.641413
891.2906982
0
8084gc04
-0.05898051
453.0145797
471.9185863
0
8034mb04
-0.102981987
1034.036925
1110.546415
0
8034sb06
-0.110095963
562.790423
607.4197179
0
8035fe07
0.200682243
254.2874045
221.2653832
-50
8035gc05
0.387248808
881.3547077
673.8717055
0
8035me09
0.6622826
1350.775699
853.525127
0
8035lc05
0.853366384
2308.322857
1277.637567
0
8036da12
0.141488797
201.2225033
182.4249247
-50
8036ia01
0.333269671
698.2895148
554.2572125
0
7018lf08
0.184858584
290.1455026
255.2512424
-50
7018kd08
-0.310804559
434.8901326
539.4373944
0
7018hf09
0.155431315
771.9678848
693.1220981
0
7018oc05
0.025535894
562.1750147
552.3119881
0
Total number of rows:
14044
Table truncated, full table size
649 Kbytes
.
Supplementary data files not provided
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