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Sample GSM437956 Query DataSets for GSM437956
Status Public on Jan 13, 2010
Title R/M 0/100 rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics ratio mix: 100% MCF-7
cell type: Breast Adenocarcinoma (MCF-7)
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17573 Whole-Genome Gene Expression Profiling of FFPE Raji and MCF-7 Mixed Ratio Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
R/M 0/100 rep2.Avg_NBEADS
R/M 0/100 rep2.BEAD_STDERR
R/M 0/100 rep2.Detection Pval

Data table
ID_REF VALUE R/M 0/100 rep2.Avg_NBEADS R/M 0/100 rep2.BEAD_STDERR R/M 0/100 rep2.Detection Pval
ILMN_1762337 4565.166 46 267.1034 0
ILMN_2055271 178.0361 24 27.44245 0.04530744
ILMN_2383229 40.97608 44 12.80913 0.4854369
ILMN_1806310 56.99651 38 10.49749 0.2783172
ILMN_1779670 36.44503 52 13.83767 0.5728155
ILMN_2321282 108.0039 32 18.97855 0.08737864
ILMN_1772582 438.4846 40 24.49509 0.009708738
ILMN_1717783 988.7282 39 95.37218 0
ILMN_1814316 53.88099 38 13.8292 0.3203883
ILMN_2359168 33.47271 47 13.00724 0.6278317
ILMN_1731507 45.4111 33 13.75876 0.4271845
ILMN_1787689 74.45472 36 10.57161 0.1650485
ILMN_1745607 123.3827 49 12.40479 0.06148867
ILMN_2136495 491.0625 34 28.71151 0.003236246
ILMN_1668111 37.01702 32 10.57766 0.5566343
ILMN_2295559 45.96331 39 9.723969 0.420712
ILMN_1735045 3335.68 53 170.7274 0
ILMN_1680754 61.36753 35 11.59484 0.2491909
ILMN_2375184 79.67873 38 17.84686 0.1423948
ILMN_1659452 98.90233 40 11.1233 0.09708738

Total number of rows: 24526

Table truncated, full table size 935 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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